Phenazine
Everything that changed this flow. Back to the flow
489f32a8-e6c4-42d7-9511-97f538e89a7c
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 13157' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=phenazine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'92-82-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a89ba5f9ccaf5d70: {'92-82-0': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['92-82-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_36674']; candidate_pubchem_cids=[4757]; selected_pubchem_cids=[4757]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 9,403 | bootstrap_labels | prefLabel | — | [{"@value":"phenazine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Bootstrapped prefLabel from legacy name field |
| 9,404 | bootstrap_labels | name | phenazine | — | Purged legacy name field to enforce prefLabel usage |
| 9,405 | bootstrap_labels | synonyms | ["9,10-Diazaanthracene","AC-16674","AC1L1IVW","AKOS002276063","Acridizine","Azophenylene","CPD-12873","CU-01000131491-2… | [] | Removed legacy synonyms field in favor of structured labels |
| 84,446 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 84,447 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 216,466 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,304 | normalize_name_case | prefLabel | [{"@value":"phenazine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Phenazine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 236,174 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 236,175 | enrich_references | skos_definition | — | [{"@value":"An azaarene that is anthracene in which the carbon atoms at positions 9 and 10 are replaced by nitrogen ato… | Merged ChEBI/PubChem definitions into skos:definition |
| 236,176 | enrich_references | references | [] | [{"@id":"gmelin:201469","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"con… | Added references with provenance; cas_numbers=['92-82-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_36674']; candidate_pubchem_cids=[4757]; selected_pubchem_cids=[4757]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,903 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | rdkit_pre_consensus from 'C1=CC=C2C(=C1)N=C3C=CC=CC3=N2'; added: monoisotopic_mass |
| 255,734 | chebi_altlabels | altLabel | [] | [{"@value":"9,10-diazaanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,576 | consensus_match | altLabel | [{"@value":"9,10-diazaanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | [{"@value":"9,10-diazaanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | group_key=phenazine||dimension=Environmental > media=Air > strata=Unknown; cas=92-82-0; added Common Chemistry CAS names as altLabel: NSC 13157; object_uuid=fo-a89ba5f9ccaf5d70 |
| 270,577 | consensus_match | cas_match_labels | — | {"92-82-0":"exactMatch"} | group_key=phenazine||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'92-82-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a89ba5f9ccaf5d70: {'92-82-0': 'exactMatch'} |
| 276,091 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Phenazine' |
| 282,663 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | rdkit_post_consensus from 'c1ccc2nc3ccccc3nc2c1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,225 | strip_catalogue_altlabels | altLabel | [{"@value":"9,10-diazaanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | [{"@value":"9,10-diazaanthracene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | Removed 1 catalogue altLabel value(s): 'NSC 13157' (registry code) |
| 323,237 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/489f32a8-e6c4-… | associations resolved on the elementary layer |
| 390,435 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H8N2"],… | typed the way the ontology types it |
| 398,042 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/9403 | prefLabel | ef:agent/bootstrap_labels | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v0 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v1 |
| ef:activity/change/20260821T1554374006150000/9404 | name | ef:agent/bootstrap_labels | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v1 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v2 |
| ef:activity/change/20260821T1554374006150000/9405 | synonyms | ef:agent/bootstrap_labels | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v2 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v3 |
| ef:activity/change/20260821T1554374006150000/84446 | context | ef:agent/default_context_mapping | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v3 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v4 |
| ef:activity/change/20260821T1554374006150000/84447 | context_iri | ef:agent/default_context_mapping | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v4 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v5 |
| ef:activity/change/20260821T1554374006150000/216466 | unit_iri | ef:agent/unit_normalization | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v5 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v6 |
| ef:activity/change/20260821T1554374006150000/223304 | prefLabel | ef:agent/normalize_name_case | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v6 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v7 |
| ef:activity/change/20260821T1554374006150000/236174 | properties | ef:agent/enrich_references | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v7 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v8 |
| ef:activity/change/20260821T1554374006150000/236175 | skos_definition | ef:agent/enrich_references | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v8 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v9 |
| ef:activity/change/20260821T1554374006150000/236176 | references | ef:agent/enrich_references | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v9 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v10 |
| ef:activity/change/20260821T1554374006150000/250903 | properties | ef:agent/rdkit_pre_consensus | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v10 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v11 |
| ef:activity/change/20260821T1554374006150000/255734 | altLabel | ef:agent/chebi_altlabels | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v11 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v12 |
| ef:activity/change/20260821T1554374006150000/270576 | altLabel | ef:agent/consensus_match | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v12 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v13 |
| ef:activity/change/20260821T1554374006150000/270577 | cas_match_labels | ef:agent/consensus_match | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v13 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v14 |
| ef:activity/change/20260821T1554374006150000/276091 | properties | ef:agent/opsin_iupac | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v14 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v15 |
| ef:activity/change/20260821T1554374006150000/282663 | properties | ef:agent/rdkit_post_consensus | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v15 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v16 |
| ef:activity/change/20260821T1554374006150000/289225 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v16 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v17 |
| ef:activity/change/20260821T1554374006150000/323237 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v17 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v18 |
| ef:activity/change/20260821T1554374006150000/390435 | properties | ef:agent/normalise_property_values | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v18 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v19 |
| ef:activity/change/20260821T1554374006150000/398042 | types | ef:agent/link_flows_to_their_substance | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v19 | ef:flow/489f32a8-e6c4-42d7-9511-97f538e89a7c/v20 |