Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'AB 2' (grade code), 'NSC 118976' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=benzylisothiocyanate||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'622-78-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b632a9625a3b6f07: {'622-78-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 210-753-9 from CAS 622-78-6
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['622-78-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17484']; candidate_pubchem_cids=[2346, 98285]; selected_pubchem_cids=[2346]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
20,546 bootstrap_labels prefLabel [{"@value":"benzyl isothiocyanate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Bootstrapped prefLabel from legacy name field
20,547 bootstrap_labels name benzyl isothiocyanate Purged legacy name field to enforce prefLabel usage
20,548 bootstrap_labels synonyms ["(Isothiocyanatomethyl)benzene","AB 2 (VAN)","AB1003147","AC1L1DH3","AC1Q7EX9","AC1Q7EYE","AKOS000212138","BB_SC-6549"… [] Removed legacy synonyms field in favor of structured labels
85,266 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
85,267 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
219,988 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,750 normalize_name_case prefLabel [{"@value":"benzyl isothiocyanate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… [{"@value":"Benzyl Isothiocyanate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,049 ec_cross_check ec_numbers [] ["210-753-9"] Resolved from EC-inventory: 210-753-9 from CAS 622-78-6
246,150 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
246,151 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
246,152 enrich_references references [] [{"@id":"beilstein:386135","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['622-78-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_17484']; candidate_pubchem_cids=[2346, 98285]; selected_pubchem_cids=[2346]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
257,015 chebi_altlabels altLabel [] [{"@value":"(isothiocyanatomethyl)benzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,196 consensus_match altLabel [{"@value":"(isothiocyanatomethyl)benzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"(isothiocyanatomethyl)benzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… group_key=benzylisothiocyanate||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=622-78-6; added Common Chemistry CAS names as altLabel: 1-(Isothiocyanatomethyl)benzene, AB 2, Benzene, (isothiocyanatomethyl)-, Benzenemethanesulfenyl isocyanate, Benzyl mustard oil, NSC 118976, Phenylmethyl isothiocyanate, Tromacaps, Tromalyt, Urogran; object_uuid=fo-b632a9625a3b6f07
264,197 consensus_match cas_match_labels {"622-78-6":"exactMatch"} group_key=benzylisothiocyanate||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'622-78-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b632a9625a3b6f07: {'622-78-6': 'exactMatch'}
278,994 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Benzyl Isothiocyanate'
285,818 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… rdkit_post_consensus from 'S=C=NCc1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,343 strip_catalogue_altlabels altLabel [{"@value":"(isothiocyanatomethyl)benzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… [{"@value":"(isothiocyanatomethyl)benzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:was… Removed 2 catalogue altLabel value(s): 'AB 2' (grade code), 'NSC 118976' (registry code)
323,648 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4a1a5721-9d6f-… associations resolved on the elementary layer
393,376 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NS"],"… typed the way the ontology types it
402,304 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/20546 prefLabel ef:agent/bootstrap_labels ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v0 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v1
ef:activity/change/20260821T1554374006150000/20547 name ef:agent/bootstrap_labels ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v1 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v2
ef:activity/change/20260821T1554374006150000/20548 synonyms ef:agent/bootstrap_labels ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v2 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v3
ef:activity/change/20260821T1554374006150000/85266 context ef:agent/default_context_mapping ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v3 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v4
ef:activity/change/20260821T1554374006150000/85267 context_iri ef:agent/default_context_mapping ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v4 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v5
ef:activity/change/20260821T1554374006150000/219988 unit_iri ef:agent/unit_normalization ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v5 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v6
ef:activity/change/20260821T1554374006150000/225750 prefLabel ef:agent/normalize_name_case ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v6 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v7
ef:activity/change/20260821T1554374006150000/227049 ec_numbers ef:agent/ec_cross_check ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v7 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v8
ef:activity/change/20260821T1554374006150000/246150 properties ef:agent/enrich_references ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v8 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v9
ef:activity/change/20260821T1554374006150000/246151 skos_definition ef:agent/enrich_references ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v9 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v10
ef:activity/change/20260821T1554374006150000/246152 references ef:agent/enrich_references ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v10 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v11
ef:activity/change/20260821T1554374006150000/257015 altLabel ef:agent/chebi_altlabels ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v11 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v12
ef:activity/change/20260821T1554374006150000/264196 altLabel ef:agent/consensus_match ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v12 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v13
ef:activity/change/20260821T1554374006150000/264197 cas_match_labels ef:agent/consensus_match ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v13 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v14
ef:activity/change/20260821T1554374006150000/278994 properties ef:agent/opsin_iupac ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v14 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v15
ef:activity/change/20260821T1554374006150000/285818 properties ef:agent/rdkit_post_consensus ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v15 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v16
ef:activity/change/20260821T1554374006150000/291343 altLabel ef:agent/strip_catalogue_altlabels ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v16 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v17
ef:activity/change/20260821T1554374006150000/323648 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v17 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v18
ef:activity/change/20260821T1554374006150000/393376 properties ef:agent/normalise_property_values ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v18 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v19
ef:activity/change/20260821T1554374006150000/402304 types ef:agent/link_flows_to_their_substance ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v19 ef:flow/4a1a5721-9d6f-41e8-823a-090247d39285/v20

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