Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=[(z)-hex-3-enyl]acetate||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'3681-71-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7f7e29e436c1bbb7: {'3681-71-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['3681-71-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_61316']; candidate_pubchem_cids=[9317, 15574, 5352557, 5363388, 13770153, 57349423, 77519701]; selected_pubchem_cids=[5363388]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
1,406 bootstrap_labels prefLabel [{"@value":"[(z)-hex-3-enyl] acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Bootstrapped prefLabel from legacy name field
1,407 bootstrap_labels name [(z)-hex-3-enyl] acetate Purged legacy name field to enforce prefLabel usage
1,408 bootstrap_labels synonyms ["organic","(z)-hex-3-enylacetate"] [] Removed legacy synonyms field in favor of structured labels
86,804 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
86,805 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
213,810 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,417 normalize_name_case prefLabel [{"@value":"[(z)-hex-3-enyl] acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… [{"@value":"[(z)-hex-3-enyl] Acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,537 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,538 enrich_references skos_definition [{"@value":"An acetate ester that results from the formal condensation of acetic acid with (Z)-hex-3-en-1-ol.","@langua… Merged ChEBI/PubChem definitions into skos:definition
228,539 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J118.141F","provenance":{"prov:wasGeneratedBy":"enrich_referen… Added references with provenance; cas_numbers=['3681-71-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_61316']; candidate_pubchem_cids=[9317, 15574, 5352557, 5363388, 13770153, 57349423, 77519701]; selected_pubchem_cids=[5363388]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,713 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… rdkit_pre_consensus from 'CC/C=CCCOC(C)=O'; added: inchi2d_string
254,548 chebi_altlabels altLabel [] [{"@value":"(3Z)-hex-3-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,425 consensus_match altLabel [{"@value":"(3Z)-hex-3-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"(3Z)-hex-3-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… group_key=[(z)-hex-3-enyl]acetate||dimension=Environmental > media=Water > water_body=Long-term; cas=3681-71-8; added Common Chemistry CAS names as altLabel: (3<em>Z</em>)-Hexen-1-yl acetate, (<em>Z</em>)-3-Hexen-1-ol acetate, (<em>Z</em>)-Hex-3-en-1-yl acetate, 3-Hexen-1-ol, 1-acetate, (3<em>Z</em>)-, 3-Hexen-1-ol, acetate, (3<em>Z</em>)-, 3-Hexen-1-ol, acetate, (<em>Z</em>)-, 3<em>Z</em>-Hexen-1-ol acetate, <em>cis</em>-3-Hexen-1-ol acetate, <em>cis</em>-3-Hexenol acetate, <em>cis</em>-Hex-3-en-1-yl acetate, Leaf acetate; object_uuid=fo-7f7e29e436c1bbb7
263,426 consensus_match cas_match_labels {"3681-71-8":"exactMatch"} group_key=[(z)-hex-3-enyl]acetate||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'3681-71-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-7f7e29e436c1bbb7: {'3681-71-8': 'exactMatch'}
273,853 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '[(z)-hex-3-enyl] Acetate'
280,237 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… rdkit_post_consensus from 'CC/C=C\\CCOC(C)=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,050 dedupe_altlabels altLabel [{"@value":"(3Z)-hex-3-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… [{"@value":"(3Z)-hex-3-en-1-yl acetate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAtt… Deduplicated altLabel values and removed entries matching prefLabel
324,440 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4cd230b0-3b88-… associations resolved on the elementary layer
388,138 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… typed the way the ontology types it
394,742 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,743 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14O2"],… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/1406 prefLabel ef:agent/bootstrap_labels ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v0 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v1
ef:activity/change/20260820T1555490862250000/1407 name ef:agent/bootstrap_labels ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v1 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v2
ef:activity/change/20260820T1555490862250000/1408 synonyms ef:agent/bootstrap_labels ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v2 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v3
ef:activity/change/20260820T1555490862250000/86804 context ef:agent/default_context_mapping ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v3 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v4
ef:activity/change/20260820T1555490862250000/86805 context_iri ef:agent/default_context_mapping ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v4 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v5
ef:activity/change/20260820T1555490862250000/213810 unit_iri ef:agent/unit_normalization ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v5 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v6
ef:activity/change/20260820T1555490862250000/221417 prefLabel ef:agent/normalize_name_case ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v6 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v7
ef:activity/change/20260820T1555490862250000/228537 properties ef:agent/enrich_references ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v7 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v8
ef:activity/change/20260820T1555490862250000/228538 skos_definition ef:agent/enrich_references ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v8 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v9
ef:activity/change/20260820T1555490862250000/228539 references ef:agent/enrich_references ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v9 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v10
ef:activity/change/20260820T1555490862250000/248713 properties ef:agent/rdkit_pre_consensus ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v10 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v11
ef:activity/change/20260820T1555490862250000/254548 altLabel ef:agent/chebi_altlabels ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v11 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v12
ef:activity/change/20260820T1555490862250000/263425 altLabel ef:agent/consensus_match ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v12 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v13
ef:activity/change/20260820T1555490862250000/263426 cas_match_labels ef:agent/consensus_match ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v13 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v14
ef:activity/change/20260820T1555490862250000/273853 properties ef:agent/opsin_iupac ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v14 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v15
ef:activity/change/20260820T1555490862250000/280237 properties ef:agent/rdkit_post_consensus ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v15 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v16
ef:activity/change/20260820T1555490862250000/292050 altLabel ef:agent/dedupe_altlabels ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v16 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v17
ef:activity/change/20260820T1555490862250000/324440 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v17 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v18
ef:activity/change/20260820T1555490862250000/388138 properties ef:agent/normalise_property_values ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v18 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v19
ef:activity/change/20260820T1555490862250000/394742 types ef:agent/link_flows_to_their_substance ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v19 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v20
ef:activity/change/20260820T1555490862250000/394743 properties ef:agent/link_flows_to_their_substance ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v20 ef:flow/4cd230b0-3b88-46fe-a377-bbd6ff589ae9/v21

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