5-azacytidine
Everything that changed this flow. Back to the flow
4d9a8790-3ddd-11dd-9089-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 3 catalogue altLabel value(s): 'CC 486' (grade code), 'NSC 102816' (registry code), 'U 18496' (grade code) |
| cas_match_labels | 1 | consensus_match | group_key=5-azacytidine||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'320-67-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ad9ef247c4e76d30: {'320-67-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 206-280-2 from CAS 320-67-2 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| prefLabel | 1 | bootstrap_labels | Bootstrapped prefLabel from legacy name field |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['320-67-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2038']; candidate_pubchem_cids=[1805, 9444, 6420049, 12907243, 12907244, 12907245, 44629846, 45357134, 57416895, 134714751, 135422442]; selected_pubchem_cids=[9444]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 3,610 | bootstrap_labels | prefLabel | — | [{"@value":"5-azacytidine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 3,611 | bootstrap_labels | name | 5-azacytidine | — | Purged legacy name field to enforce prefLabel usage |
| 3,612 | bootstrap_labels | synonyms | ["1,3,5-Triazin-2(1H)-one, 4-amino-1-beta-D-ribofuranosyl-","2-(beta-D-Ribofuranosyl)-4-amino-1,3,5-triazin-2-one","4-A… | [] | Removed legacy synonyms field in favor of structured labels |
| 89,326 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 89,327 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 214,544 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,750 | ec_cross_check | ec_numbers | [] | ["206-280-2"] | Resolved from EC-inventory: 206-280-2 from CAS 320-67-2 |
| 230,665 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 230,666 | enrich_references | skos_definition | — | [{"@value":"An N-glycosyl-1,3,5-triazine that is 4-amino-1,3,5-triazin-2(1H)-one substituted by a β-D-ribofuranosyl res… | Merged ChEBI/PubChem definitions into skos:definition |
| 230,667 | enrich_references | references | [] | [{"@id":"drugcentral:25","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"co… | Added references with provenance; cas_numbers=['320-67-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2038']; candidate_pubchem_cids=[1805, 9444, 6420049, 12907243, 12907244, 12907245, 44629846, 45357134, 57416895, 134714751, 135422442]; selected_pubchem_cids=[9444]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 249,322 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | rdkit_pre_consensus from 'C1=NC(=NC(=O)N1C2C(C(C(O2)CO)O)O)N'; added: inchi2d_string, monoisotopic_mass |
| 254,842 | chebi_altlabels | altLabel | [] | [{"@value":"4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one","@language":"en","source":{"prov:wasGeneratedBy":"chebi… | Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,046 | consensus_match | altLabel | [{"@value":"4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one","@language":"en","source":{"prov:wasGeneratedBy":"chebi… | [{"@value":"4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one","@language":"en","source":{"prov:wasGeneratedBy":"chebi… | group_key=5-azacytidine||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=320-67-2; added Common Chemistry CAS names as altLabel: 1,3,5-Triazin-2(1<em>H</em>)-one, 4-amino-1-β-<span class="text-smallcaps">D</span>-ribofuranosyl-, 4-Amino-1-β-<span class="text-smallcaps">D</span>-ribofuranosyl-1,3,5-triazin-2(1<em>H</em>)-one, 5-AC, 5-AZC, 5-AZCR, 5-AzaC, 5-Azacitidine, <em>s</em>-Triazin-2(1<em>H</em>)-one, 4-amino-1-β-<span class="text-smallcaps">D</span>-ribofuranosyl-, AZA, AZA (azacitidine), Antibiotic U 18496, Azacitidine (AZA), Azacytidine, CC 486, Ladakamycin, Ledakamycin, MeSH ID: D001374, Mylosar, NSC 102816, NSC 103-627, Onureg, U 18496, Vidaza, WR 183027; object_uuid=fo-ad9ef247c4e76d30 |
| 263,047 | consensus_match | cas_match_labels | — | {"320-67-2":"exactMatch"} | group_key=5-azacytidine||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'320-67-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ad9ef247c4e76d30: {'320-67-2': 'exactMatch'} |
| 274,451 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '5-azacytidine' |
| 280,891 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | rdkit_post_consensus from 'Nc1ncn([C@@H]2O[C@H](CO)[C@@H](O)[C@H]2O)c(=O)n1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,998 | strip_catalogue_altlabels | altLabel | [{"@value":"4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one","@language":"en","source":{"prov:wasGeneratedBy":"chebi… | [{"@value":"4-Amino-1-beta-D-ribofuranosyl-s-triazin-2(1H)-one","@language":"en","source":{"prov:wasGeneratedBy":"chebi… | Removed 3 catalogue altLabel value(s): 'CC 486' (grade code), 'NSC 102816' (registry code), 'U 18496' (grade code) |
| 325,675 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… | associations resolved on the elementary layer |
| 388,748 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | typed the way the ontology types it |
| 395,613 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 395,614 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N4O5"… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/3610 | prefLabel | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v0 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v1 |
| ef:activity/change/20260821T1554374006150000/3611 | name | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v1 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v2 |
| ef:activity/change/20260821T1554374006150000/3612 | synonyms | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v2 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v3 |
| ef:activity/change/20260821T1554374006150000/89326 | context | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v3 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v4 |
| ef:activity/change/20260821T1554374006150000/89327 | context_iri | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v4 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v5 |
| ef:activity/change/20260821T1554374006150000/214544 | unit_iri | ef:agent/unit_normalization | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v5 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v6 |
| ef:activity/change/20260821T1554374006150000/226750 | ec_numbers | ef:agent/ec_cross_check | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v6 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v7 |
| ef:activity/change/20260821T1554374006150000/230665 | properties | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v7 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v8 |
| ef:activity/change/20260821T1554374006150000/230666 | skos_definition | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v8 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v9 |
| ef:activity/change/20260821T1554374006150000/230667 | references | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v9 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v10 |
| ef:activity/change/20260821T1554374006150000/249322 | properties | ef:agent/rdkit_pre_consensus | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v10 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v11 |
| ef:activity/change/20260821T1554374006150000/254842 | altLabel | ef:agent/chebi_altlabels | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v11 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v12 |
| ef:activity/change/20260821T1554374006150000/263046 | altLabel | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v12 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v13 |
| ef:activity/change/20260821T1554374006150000/263047 | cas_match_labels | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v13 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v14 |
| ef:activity/change/20260821T1554374006150000/274451 | properties | ef:agent/opsin_iupac | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v14 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v15 |
| ef:activity/change/20260821T1554374006150000/280891 | properties | ef:agent/rdkit_post_consensus | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v15 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v16 |
| ef:activity/change/20260821T1554374006150000/287998 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v16 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v17 |
| ef:activity/change/20260821T1554374006150000/325675 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v17 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v18 |
| ef:activity/change/20260821T1554374006150000/388748 | properties | ef:agent/normalise_property_values | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v18 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v19 |
| ef:activity/change/20260821T1554374006150000/395613 | types | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v19 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v20 |
| ef:activity/change/20260821T1554374006150000/395614 | properties | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v20 | ef:flow/4d9a8790-3ddd-11dd-9089-0050c2490048/v21 |