Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=methyl[(dimethoxyphosphinothioyl)thio]acetate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['ec_inventory', 'pubchem']; cas_sources={'757-86-8': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa27e7344c638446: {'757-86-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 212-058-6 from CAS 757-86-8
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['757-86-8']; matched_chebi_ids=[]; candidate_pubchem_cids=[69793, 242811, 57353444]; selected_pubchem_cids=[69793]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
7,768 bootstrap_labels prefLabel [{"@value":"methyl [(dimethoxyphosphinothioyl)thio]acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap… Bootstrapped prefLabel from legacy name field
7,769 bootstrap_labels name methyl [(dimethoxyphosphinothioyl)thio]acetate Purged legacy name field to enforce prefLabel usage
7,770 bootstrap_labels synonyms ["AC1L2COE","AC1Q44BB","AC1Q44BC","AC1Q603D","I14-14258","Methyl ((dimethoxyphosphinothioyl)thio)acetate","Methyl (Dime… [] Removed legacy synonyms field in favor of structured labels
91,450 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
91,451 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
215,931 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,913 normalize_name_case prefLabel [{"@value":"methyl [(dimethoxyphosphinothioyl)thio]acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap… [{"@value":"Methyl [(dimethoxyphosphinothioyl)thio]acetate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,845 ec_cross_check ec_numbers [] ["212-058-6"] Resolved from EC-inventory: 212-058-6 from CAS 757-86-8
234,615 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
234,616 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
234,617 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J47.254I","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['757-86-8']; matched_chebi_ids=[]; candidate_pubchem_cids=[69793, 242811, 57353444]; selected_pubchem_cids=[69793]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,449 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… rdkit_pre_consensus from 'COC(=O)CSP(=S)(OC)OC'; added: molecular_mass, monoisotopic_mass
268,791 consensus_match altLabel [] [{"@value":"<em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(methoxycarbonylmethyl)phosphorodithioate","@language":"en","sour… group_key=methyl[(dimethoxyphosphinothioyl)thio]acetate||dimension=Environmental > media=Water > water_body=Ocean; cas=757-86-8; added Common Chemistry CAS names as altLabel: <em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(methoxycarbonylmethyl)phosphorodithioate, <em>O</em>,<em>O</em>-Dimethyl-<em>S</em>-(methoxycarbonylmethyl)dithiophosphate, <em>S</em>-[(Methoxycarbonyl)methyl] <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, Acetic acid, 2-[(dimethoxyphosphinothioyl)thio]-, methyl ester, Acetic acid, [(dimethoxyphosphinothioyl)thio]-, methyl ester, Acetic acid, mercapto-, <em>S</em>-ester with <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, methyl ester, Acetic acid, mercapto-, methyl ester, <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, Acetic acid, mercapto-, methyl ester, <em>S</em>-ester with <em>O</em>,<em>O</em>-dimethyl phosphorodithioate, Dimethoic acid methyl ester, Phosphorodithioic acid, <em>O</em>,<em>O</em>-dimethyl ester, <em>S</em>-ester with methyl mercaptoacetate; object_uuid=fo-fa27e7344c638446
268,792 consensus_match cas_match_labels {"757-86-8":"exactMatch"} group_key=methyl[(dimethoxyphosphinothioyl)thio]acetate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['ec_inventory', 'pubchem']; cas_sources={'757-86-8': ['ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fa27e7344c638446: {'757-86-8': 'exactMatch'}
275,618 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Methyl [(dimethoxyphosphinothioyl)thio]acetate'
282,152 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… rdkit_post_consensus from 'COC(=O)CSP(=S)(OC)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,370 dedupe_altlabels altLabel [{"@value":"<em>O</em>,<em>O</em>-Dimethyl <em>S</em>-(methoxycarbonylmethyl)phosphorodithioate","@language":"en","sour… [{"@value":"O,O-Dimethyl S-(methoxycarbonylmethyl)phosphorodithioate","@language":"en","source":{"prov:wasGeneratedBy":… Deduplicated altLabel values and removed entries matching prefLabel
326,731 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
389,940 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H11O4PS2… typed the way the ontology types it
397,337 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/7768 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v1
ef:activity/change/20260822T0600486828500000/7769 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v2
ef:activity/change/20260822T0600486828500000/7770 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v3
ef:activity/change/20260822T0600486828500000/91450 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v4
ef:activity/change/20260822T0600486828500000/91451 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v5
ef:activity/change/20260822T0600486828500000/215931 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v6
ef:activity/change/20260822T0600486828500000/222913 prefLabel ef:agent/normalize_name_case ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v7
ef:activity/change/20260822T0600486828500000/226845 ec_numbers ef:agent/ec_cross_check ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v8
ef:activity/change/20260822T0600486828500000/234615 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v9
ef:activity/change/20260822T0600486828500000/234616 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v10
ef:activity/change/20260822T0600486828500000/234617 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v11
ef:activity/change/20260822T0600486828500000/250449 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v12
ef:activity/change/20260822T0600486828500000/268791 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v13
ef:activity/change/20260822T0600486828500000/268792 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v14
ef:activity/change/20260822T0600486828500000/275618 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v15
ef:activity/change/20260822T0600486828500000/282152 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v16
ef:activity/change/20260822T0600486828500000/292370 altLabel ef:agent/dedupe_altlabels ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v17
ef:activity/change/20260822T0600486828500000/326731 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v18
ef:activity/change/20260822T0600486828500000/389940 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v19
ef:activity/change/20260822T0600486828500000/397337 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-94b4-0050c2490048/v20

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