Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 169448' (registry code), 'Wy 3498' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=oxazepam||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'604-75-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-55a3981174c4d70d: {'604-75-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['604-75-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7823']; candidate_pubchem_cids=[4616, 667436]; selected_pubchem_cids=[4616]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
15,376 bootstrap_labels prefLabel [{"@value":"oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
15,377 bootstrap_labels name oxazepam Purged legacy name field to enforce prefLabel usage
15,378 bootstrap_labels synonyms ["(+-)-7-Chloro-1,3-dihydro-3-hydroxy-5-phenyl-2H-1,4-benzodiazepin-2-one","(+-)-Oxazepam","(RS)-Oxazepam","1,3-Dihydro… [] Removed legacy synonyms field in favor of structured labels
92,096 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Ocean"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
92,097 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-ocea Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water
218,399 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,628 normalize_name_case prefLabel [{"@value":"oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
241,689 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,690 enrich_references skos_definition [{"@value":"A 1,4-benzodiazepinone that is 1,3-dihydro-2H-1,4-benzodiazepin-2-one substituted by a chloro group at posi… Merged ChEBI/PubChem definitions into skos:definition
241,691 enrich_references references [] [{"@id":"drugcentral:2015","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['604-75-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7823']; candidate_pubchem_cids=[4616, 667436]; selected_pubchem_cids=[4616]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,497 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… rdkit_pre_consensus from 'C1=CC=C(C=C1)C2=NC(C(=O)NC3=C2C=C(C=C3)Cl)O'; added: monoisotopic_mass
256,419 chebi_altlabels altLabel [] [{"@value":"(+-)-Oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… Added 5 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,209 consensus_match altLabel [{"@value":"(+-)-Oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"(+-)-Oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… group_key=oxazepam||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=604-75-1; added Common Chemistry CAS names as altLabel: (±)-Oxazepam, 2<em>H</em>-1,4-Benzodiazepin-2-one, 7-chloro-1,3-dihydro-3-hydroxy-5-phenyl-, 3-Hydroxynordiazepam, 7-Chloro-1,3-dihydro-3-hydroxy-5-phenyl-2<em>H</em>-1,4-benzodiazepin-2-one, 7-Chloro-3-hydroxy-5-phenyl-1<em>H</em>-1,4-benzodiazepin-2(3<em>H</em>)-one, <em>N</em>-Desmethyltemazepam, Adumbran, Anxiolit, Anxiolit retard, Aplakil, Astress, Azutranquil, Bonare, Drimuel, Droxacepam, Durazepam, Enidrel, Hi-Long, Isodin, Lederpam, Limbial, MeSH ID: D010076, NSC 169448, Nesontil, Noctazepam, Nortemazepam, Nozepam, Oxa-puren, Oxanid, Praxiten, Propax, Psiquiwas, Quilibrex, Ro 5-6789, Rondar, Serenal, Serenid, Serenid-D, Serepax, Seresta, Sigacalm, Sobril, Tarchomin, Uskan, Wy 3498, Zaxopam; object_uuid=fo-55a3981174c4d70d
270,210 consensus_match cas_match_labels {"604-75-1":"exactMatch"} group_key=oxazepam||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'604-75-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-55a3981174c4d70d: {'604-75-1': 'exactMatch'}
277,697 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '7-chloro-3-hydroxy-5-phenyl-1,3-dihydro-2H-1,4-benzodiazepin-2-one'
284,396 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… rdkit_post_consensus from 'O=C1Nc2ccc(Cl)cc2C(c2ccccc2)=NC1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,390 strip_catalogue_altlabels altLabel [{"@value":"(+-)-Oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… [{"@value":"(+-)-Oxazepam","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… Removed 2 catalogue altLabel value(s): 'NSC 169448' (registry code), 'Wy 3498' (grade code)
327,054 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
392,051 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H11ClN2… typed the way the ontology types it
400,345 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,346 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/15376 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v1
ef:activity/change/20260822T0600486828500000/15377 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v2
ef:activity/change/20260822T0600486828500000/15378 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v3
ef:activity/change/20260822T0600486828500000/92096 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v4
ef:activity/change/20260822T0600486828500000/92097 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v5
ef:activity/change/20260822T0600486828500000/218399 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v6
ef:activity/change/20260822T0600486828500000/224628 prefLabel ef:agent/normalize_name_case ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v7
ef:activity/change/20260822T0600486828500000/241689 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v8
ef:activity/change/20260822T0600486828500000/241690 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v9
ef:activity/change/20260822T0600486828500000/241691 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v10
ef:activity/change/20260822T0600486828500000/252497 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v11
ef:activity/change/20260822T0600486828500000/256419 altLabel ef:agent/chebi_altlabels ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v12
ef:activity/change/20260822T0600486828500000/270209 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v13
ef:activity/change/20260822T0600486828500000/270210 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v14
ef:activity/change/20260822T0600486828500000/277697 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v15
ef:activity/change/20260822T0600486828500000/284396 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v16
ef:activity/change/20260822T0600486828500000/290390 altLabel ef:agent/strip_catalogue_altlabels ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v17
ef:activity/change/20260822T0600486828500000/327054 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v18
ef:activity/change/20260822T0600486828500000/392051 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v19
ef:activity/change/20260822T0600486828500000/400345 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v20
ef:activity/change/20260822T0600486828500000/400346 roles ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v20 ef:flow/4d9a8790-3ddd-11dd-9603-0050c2490048/v21

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