Pebulate
Everything that changed this flow. Back to the flow
4d9a8790-3ddd-11dd-9622-0050c2490048
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'R 2061' (grade code), 'Stauffer 2061' (trade name) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=pebulate||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1114-71-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b120290a9ff4a480: {'1114-71-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['1114-71-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81939']; candidate_pubchem_cids=[14215]; selected_pubchem_cids=[14215]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 15,539 | bootstrap_labels | prefLabel | — | [{"@value":"pebulate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Bootstrapped prefLabel from legacy name field |
| 15,540 | bootstrap_labels | name | pebulate | — | Purged legacy name field to enforce prefLabel usage |
| 15,541 | bootstrap_labels | synonyms | ["AC1L23CT","Butylethylcarbamothioic acid S-propyl ester","Butylethylthiocarbamic acid S-propyl ester","Carbamic acid,… | [] | Removed legacy synonyms field in favor of structured labels |
| 92,158 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Surface water"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 92,159 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-suwa | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 218,451 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,670 | normalize_name_case | prefLabel | [{"@value":"pebulate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | [{"@value":"Pebulate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 241,827 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 241,828 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 241,829 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J55.508H","provenance":{"prov:wasGeneratedBy":"enrich_referenc… | Added references with provenance; cas_numbers=['1114-71-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_81939']; candidate_pubchem_cids=[14215]; selected_pubchem_cids=[14215]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,540 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | rdkit_pre_consensus from 'CCCCN(CC)C(=O)SCCC'; added: monoisotopic_mass |
| 270,385 | consensus_match | altLabel | [] | [{"@value":"<em>S</em>-Propyl butylethylthiocarbamate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_matc… | group_key=pebulate||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=1114-71-2; added Common Chemistry CAS names as altLabel: <em>S</em>-Propyl butylethylthiocarbamate, <em>S</em>-Propyl-<em>N</em>-butyl-<em>N</em>-ethylthiocarbamate, <em>S</em>-Propyl-<em>N</em>-ethyl-<em>N</em>-butylthiocarbamate, Butylethylthiocarbamic acid <em>S</em>-propyl ester, Carbamic acid, butylethylthio-, <em>S</em>-propyl ester, Carbamothioic acid, <em>N</em>-butyl-<em>N</em>-ethyl-, <em>S</em>-propyl ester, Carbamothioic acid, butylethyl-, <em>S</em>-propyl ester, PEBC, R 2061, Stauffer 2061, Stauffer R 2061, Tillam; object_uuid=fo-b120290a9ff4a480 |
| 270,386 | consensus_match | cas_match_labels | — | {"1114-71-2":"exactMatch"} | group_key=pebulate||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1114-71-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b120290a9ff4a480: {'1114-71-2': 'exactMatch'} |
| 277,745 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'S-Propyl butylethylthiocarbamate' |
| 284,444 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | rdkit_post_consensus from 'CCCCN(CC)C(=O)SCCC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,425 | strip_catalogue_altlabels | altLabel | [{"@value":"<em>S</em>-Propyl butylethylthiocarbamate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_matc… | [{"@value":"S-Propyl butylethylthiocarbamate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:… | Removed 2 catalogue altLabel value(s): 'R 2061' (grade code), 'Stauffer 2061' (trade name) |
| 327,085 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… | associations resolved on the elementary layer |
| 392,098 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H21NOS"… | typed the way the ontology types it |
| 400,408 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/15539 | prefLabel | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v0 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v1 |
| ef:activity/change/20260822T0600486828500000/15540 | name | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v1 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v2 |
| ef:activity/change/20260822T0600486828500000/15541 | synonyms | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v2 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v3 |
| ef:activity/change/20260822T0600486828500000/92158 | context | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v3 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v4 |
| ef:activity/change/20260822T0600486828500000/92159 | context_iri | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v4 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v5 |
| ef:activity/change/20260822T0600486828500000/218451 | unit_iri | ef:agent/unit_normalization | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v5 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v6 |
| ef:activity/change/20260822T0600486828500000/224670 | prefLabel | ef:agent/normalize_name_case | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v6 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v7 |
| ef:activity/change/20260822T0600486828500000/241827 | properties | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v7 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v8 |
| ef:activity/change/20260822T0600486828500000/241828 | skos_definition | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v8 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v9 |
| ef:activity/change/20260822T0600486828500000/241829 | references | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v9 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v10 |
| ef:activity/change/20260822T0600486828500000/252540 | properties | ef:agent/rdkit_pre_consensus | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v10 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v11 |
| ef:activity/change/20260822T0600486828500000/270385 | altLabel | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v11 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v12 |
| ef:activity/change/20260822T0600486828500000/270386 | cas_match_labels | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v12 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v13 |
| ef:activity/change/20260822T0600486828500000/277745 | properties | ef:agent/opsin_iupac | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v13 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v14 |
| ef:activity/change/20260822T0600486828500000/284444 | properties | ef:agent/rdkit_post_consensus | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v14 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v15 |
| ef:activity/change/20260822T0600486828500000/290425 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v15 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v16 |
| ef:activity/change/20260822T0600486828500000/327085 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v16 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v17 |
| ef:activity/change/20260822T0600486828500000/392098 | properties | ef:agent/normalise_property_values | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v17 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v18 |
| ef:activity/change/20260822T0600486828500000/400408 | types | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v18 | ef:flow/4d9a8790-3ddd-11dd-9622-0050c2490048/v19 |