Safrole
Everything that changed this flow. Back to the flow
4d9a8790-3ddd-11dd-9731-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'Alda 89' (grade code), 'NSC 11831' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=safrole||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'94-59-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bc087c14d1a9b85c: {'94-59-7': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['94-59-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8994']; candidate_pubchem_cids=[5144, 262093]; selected_pubchem_cids=[5144]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 7,276 | bootstrap_labels | prefLabel | — | [{"@value":"safrole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bright… | Bootstrapped prefLabel from legacy name field |
| 7,277 | bootstrap_labels | name | safrole | — | Purged legacy name field to enforce prefLabel usage |
| 7,278 | bootstrap_labels | synonyms | ["(Allyldioxy)benzene methylene ether","1,2-(Methylenedioxy)-4-allylbenzene","1,2-Methylenedioxy-4-allylbenzene","1,3-B… | [] | Removed legacy synonyms field in favor of structured labels |
| 92,687 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 92,688 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 215,771 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,776 | normalize_name_case | prefLabel | [{"@value":"safrole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bright… | [{"@value":"Safrole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"bright… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 234,160 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 234,161 | enrich_references | skos_definition | — | [{"@value":"A member of the class of benzodioxoles that is 1,3-benzodioxole which is substituted by an allyl group at p… | Merged ChEBI/PubChem definitions into skos:definition |
| 234,162 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.946B","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['94-59-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_8994']; candidate_pubchem_cids=[5144, 262093]; selected_pubchem_cids=[5144]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 255,326 | chebi_altlabels | altLabel | [] | [{"@value":"1,2-methylenedioxy-4-allylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… | Added 14 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,559 | consensus_match | altLabel | [{"@value":"1,2-methylenedioxy-4-allylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… | [{"@value":"1,2-methylenedioxy-4-allylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… | group_key=safrole||dimension=Environmental > media=Ground > geography=Agricultural; cas=94-59-7; added Common Chemistry CAS names as altLabel: 1,3-Benzodioxole, 5-(2-propen-1-yl)-, 1,3-Benzodioxole, 5-(2-propenyl)-, 3,4-Methylenedioxy-allylbenzene, 4-Allyl-1,2-(methylenedioxy)benzene, 5-(2-Propen-1-yl)-1,3-benzodioxole, 5-Allylbenzo[<em>d</em>][1,3]dioxole, Alda 89, Allyldioxybenzene methylene ether, Allylpyrocatechol methylene ether, Benzene, 4-allyl-1,2-(methylenedioxy)-, MeSH ID: D012451, NSC 11831, Rhyuno oil, Safrole MF, Shikomol; object_uuid=fo-bc087c14d1a9b85c |
| 271,560 | consensus_match | cas_match_labels | — | {"94-59-7":"exactMatch"} | group_key=safrole||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'94-59-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bc087c14d1a9b85c: {'94-59-7': 'exactMatch'} |
| 275,486 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Safrole' |
| 282,006 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | rdkit_post_consensus from 'C=CCc1ccc2c(c1)OCO2'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,764 | strip_catalogue_altlabels | altLabel | [{"@value":"1,2-methylenedioxy-4-allylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… | [{"@value":"1,2-methylenedioxy-4-allylbenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov… | Removed 2 catalogue altLabel value(s): 'Alda 89' (grade code), 'NSC 11831' (registry code) |
| 327,388 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… | associations resolved on the elementary layer |
| 389,823 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H10O2"]… | typed the way the ontology types it |
| 397,133 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 397,134 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24852","rdfs:label":"insecticide","http://www.w3.org/2004/02/skos/core#de… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20261019T0712047113160000/7276 | prefLabel | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v0 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v1 |
| ef:activity/change/20261019T0712047113160000/7277 | name | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v1 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v2 |
| ef:activity/change/20261019T0712047113160000/7278 | synonyms | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v2 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v3 |
| ef:activity/change/20261019T0712047113160000/92687 | context | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v3 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v4 |
| ef:activity/change/20261019T0712047113160000/92688 | context_iri | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v4 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v5 |
| ef:activity/change/20261019T0712047113160000/215771 | unit_iri | ef:agent/unit_normalization | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v5 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v6 |
| ef:activity/change/20261019T0712047113160000/222776 | prefLabel | ef:agent/normalize_name_case | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v6 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v7 |
| ef:activity/change/20261019T0712047113160000/234160 | properties | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v7 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v8 |
| ef:activity/change/20261019T0712047113160000/234161 | skos_definition | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v8 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v9 |
| ef:activity/change/20261019T0712047113160000/234162 | references | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v9 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v10 |
| ef:activity/change/20261019T0712047113160000/255326 | altLabel | ef:agent/chebi_altlabels | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v10 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v11 |
| ef:activity/change/20261019T0712047113160000/271559 | altLabel | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v11 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v12 |
| ef:activity/change/20261019T0712047113160000/271560 | cas_match_labels | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v12 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v13 |
| ef:activity/change/20261019T0712047113160000/275486 | properties | ef:agent/opsin_iupac | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v13 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v14 |
| ef:activity/change/20261019T0712047113160000/282006 | properties | ef:agent/rdkit_post_consensus | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v14 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v15 |
| ef:activity/change/20261019T0712047113160000/288764 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v15 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v16 |
| ef:activity/change/20261019T0712047113160000/327388 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v16 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v17 |
| ef:activity/change/20261019T0712047113160000/389823 | properties | ef:agent/normalise_property_values | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v17 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v18 |
| ef:activity/change/20261019T0712047113160000/397133 | types | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v18 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v19 |
| ef:activity/change/20261019T0712047113160000/397134 | roles | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v19 | ef:flow/4d9a8790-3ddd-11dd-9731-0050c2490048/v20 |