Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 23696' (registry code)
cas_match_labels 1 consensus_match group_key=2,3-dimethylpentane||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'565-59-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b8b362de5eca9da9: {'565-59-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 209-280-0 from CAS 565-59-3
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['565-59-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_151115']; candidate_pubchem_cids=[11260, 638047]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
8,113 bootstrap_labels prefLabel [{"@value":"2,3-dimethylpentane","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribute… Bootstrapped prefLabel from legacy name field
8,114 bootstrap_labels name 2,3-dimethylpentane Purged legacy name field to enforce prefLabel usage
8,115 bootstrap_labels synonyms ["3,4-Dimethylpentane","AC1L1WZ2","Pentane, 2,3-dimethyl-","SBB061452"] [] Removed legacy synonyms field in favor of structured labels
92,984 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
92,985 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
216,045 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,879 ec_cross_check ec_numbers [] ["209-280-0"] Resolved from EC-inventory: 209-280-0 from CAS 565-59-3
234,939 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
234,940 enrich_references skos_definition [{"@value":"An alkane that is pentane substituted by a methyl group at positions 2 and 3.","@language":"en","provenance… Merged ChEBI/PubChem definitions into skos:definition
234,941 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=565-59-3","provenance":{"prov:wasGeneratedBy":"enrich_references… Added references with provenance; cas_numbers=['565-59-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_151115']; candidate_pubchem_cids=[11260, 638047]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,543 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… rdkit_pre_consensus from 'CCC(C)C(C)C'; added: monoisotopic_mass
255,502 chebi_altlabels altLabel [] [{"@value":"3,4-dimethylpentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
259,807 consensus_match altLabel [{"@value":"3,4-dimethylpentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… [{"@value":"3,4-dimethylpentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… group_key=2,3-dimethylpentane||dimension=Environmental > media=Air > strata=Unknown; cas=565-59-3; added Common Chemistry CAS names as altLabel: (±)-2,3-Dimethylpentane, NSC 23696, Pentane, 2,3-dimethyl-; object_uuid=fo-b8b362de5eca9da9
259,808 consensus_match cas_match_labels {"565-59-3":"exactMatch"} group_key=2,3-dimethylpentane||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'565-59-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b8b362de5eca9da9: {'565-59-3': 'exactMatch'}
275,704 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,3-dimethylpentane'
282,253 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… rdkit_post_consensus from 'CCC(C)C(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
288,916 strip_catalogue_altlabels altLabel [{"@value":"3,4-dimethylpentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… [{"@value":"3,4-dimethylpentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributed… Removed 1 catalogue altLabel value(s): 'NSC 23696' (registry code)
327,491 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
390,036 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H16"],"a… typed the way the ontology types it
397,489 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/8113 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v1
ef:activity/change/20260821T0609040591070000/8114 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v2
ef:activity/change/20260821T0609040591070000/8115 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v3
ef:activity/change/20260821T0609040591070000/92984 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v4
ef:activity/change/20260821T0609040591070000/92985 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v5
ef:activity/change/20260821T0609040591070000/216045 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v6
ef:activity/change/20260821T0609040591070000/226879 ec_numbers ef:agent/ec_cross_check ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v7
ef:activity/change/20260821T0609040591070000/234939 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v8
ef:activity/change/20260821T0609040591070000/234940 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v9
ef:activity/change/20260821T0609040591070000/234941 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v10
ef:activity/change/20260821T0609040591070000/250543 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v11
ef:activity/change/20260821T0609040591070000/255502 altLabel ef:agent/chebi_altlabels ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v12
ef:activity/change/20260821T0609040591070000/259807 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v13
ef:activity/change/20260821T0609040591070000/259808 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v14
ef:activity/change/20260821T0609040591070000/275704 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v15
ef:activity/change/20260821T0609040591070000/282253 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v16
ef:activity/change/20260821T0609040591070000/288916 altLabel ef:agent/strip_catalogue_altlabels ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v17
ef:activity/change/20260821T0609040591070000/327491 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v18
ef:activity/change/20260821T0609040591070000/390036 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v19
ef:activity/change/20260821T0609040591070000/397489 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-97c7-0050c2490048/v20

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