Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 3 bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case element name from the flow object: Chlorine
cas_match_labels 1 consensus_match group_key=chlorine||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7782-50-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ca47b8a9e172dd57: {'7782-50-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7782-50-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29310']; candidate_pubchem_cids=[313, 24526, 5360523]; selected_pubchem_cids=[24526]; formula_similarity_expected=['Cl']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
13,869 bootstrap_labels prefLabel [{"@value":"chlorine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
13,870 bootstrap_labels name chlorine Purged legacy name field to enforce prefLabel usage
19,632 bootstrap_labels synonyms ["AC1L2NHV","AC1Q3VDB","Bertholite","Bertholite /warfare gas/","CL2","Chloor","Chlorinated water","Chlorinated water (c… [] Removed legacy synonyms field in favor of structured labels
94,770 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
94,771 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
217,926 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,312 normalize_name_case prefLabel [{"@value":"chlorine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Chlorine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
240,322 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,323 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
240,324 enrich_references references [] [{"@id":"beilstein:3902968","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['7782-50-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29310']; candidate_pubchem_cids=[313, 24526, 5360523]; selected_pubchem_cids=[24526]; formula_similarity_expected=['Cl']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,103 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… rdkit_pre_consensus from 'ClCl'; added: monoisotopic_mass
256,267 chebi_altlabels altLabel [] [{"@value":"Cl2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,060 consensus_match altLabel [{"@value":"Cl2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"Cl2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… group_key=chlorine||dimension=Environmental > media=Air > indoor=Unknown; cas=7782-50-5; added Common Chemistry CAS names as altLabel: Chlorine mol., Chlorine molecule (Cl<sub>2</sub>), Diatomic chlorine, MeSH ID: D002713; object_uuid=fo-ca47b8a9e172dd57
265,061 consensus_match cas_match_labels {"7782-50-5":"exactMatch"} group_key=chlorine||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'7782-50-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ca47b8a9e172dd57: {'7782-50-5': 'exactMatch'}
277,315 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'dichlorine'
283,985 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… rdkit_post_consensus from 'ClCl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,741 dedupe_altlabels altLabel [{"@value":"Cl2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… [{"@value":"Cl2","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-f… Deduplicated altLabel values and removed entries matching prefLabel
328,403 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
391,668 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… typed the way the ontology types it
399,794 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalElement"] the substance's answer, copied onto its flow
399,795 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Cl2"],"att… the substance's answer, copied onto its flow
403,829 flow_layers.pubchem_element_enrichment prefLabel [{"@value":"Chlorine","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Chlorine","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enrich… element name from the flow object: Chlorine

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/13869 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v1
ef:activity/change/20260820T1416470405690000/13870 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v2
ef:activity/change/20260820T1416470405690000/19632 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v3
ef:activity/change/20260820T1416470405690000/94770 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v4
ef:activity/change/20260820T1416470405690000/94771 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v5
ef:activity/change/20260820T1416470405690000/217926 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v6
ef:activity/change/20260820T1416470405690000/224312 prefLabel ef:agent/normalize_name_case ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v7
ef:activity/change/20260820T1416470405690000/240322 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v8
ef:activity/change/20260820T1416470405690000/240323 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v9
ef:activity/change/20260820T1416470405690000/240324 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v10
ef:activity/change/20260820T1416470405690000/252103 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v11
ef:activity/change/20260820T1416470405690000/256267 altLabel ef:agent/chebi_altlabels ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v12
ef:activity/change/20260820T1416470405690000/265060 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v13
ef:activity/change/20260820T1416470405690000/265061 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v14
ef:activity/change/20260820T1416470405690000/277315 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v15
ef:activity/change/20260820T1416470405690000/283985 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v16
ef:activity/change/20260820T1416470405690000/292741 altLabel ef:agent/dedupe_altlabels ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v17
ef:activity/change/20260820T1416470405690000/328403 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v18
ef:activity/change/20260820T1416470405690000/391668 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v19
ef:activity/change/20260820T1416470405690000/399794 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v20
ef:activity/change/20260820T1416470405690000/399795 properties ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v20 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v21
ef:activity/change/20260820T1416470405690000/403829 prefLabel ef:agent/flow_layers.pubchem_element_enrichment ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v21 ef:flow/4d9a8790-3ddd-11dd-9b48-0050c2490048/v22

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.