Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_contradicted_composition typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'CGA 45156' (grade code), 'UC 51762' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=thiodicarb||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'59669-26-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b21aec259099a23f: {'59669-26-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['59669-26-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38548']; candidate_pubchem_cids=[62155, 6165177, 6386307, 9601227, 15764483, 16126809, 71433329, 133109317]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
6,593 bootstrap_labels prefLabel [{"@value":"thiodicarb","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Bootstrapped prefLabel from legacy name field
6,594 bootstrap_labels name thiodicarb Purged legacy name field to enforce prefLabel usage
21,805 bootstrap_labels synonyms ["3,7,9,13-Tetramethyl-5,11-dioxa-2,8,14-trithia-4,7,9,12-tetra-azapentadeca-3,12-diene-6,10-dione","A93-29311","AC1L1W… [] Removed legacy synonyms field in favor of structured labels
95,442 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
95,443 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
215,547 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,613 normalize_name_case prefLabel [{"@value":"thiodicarb","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… [{"@value":"Thiodicarb","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
233,515 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14N4O4S… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
233,516 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
233,517 enrich_references references [] [{"@id":"beilstein:2015026","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['59669-26-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38548']; candidate_pubchem_cids=[62155, 6165177, 6386307, 9601227, 15764483, 16126809, 71433329, 133109317]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,147 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14N4O4S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14N4O4S… rdkit_pre_consensus from 'CSC(C)=NOC(=O)NSNC(=O)ON=C(C)SC'; added: monoisotopic_mass
255,197 chebi_altlabels altLabel [] [{"@value":"Bismethomyl thioether","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
272,600 consensus_match altLabel [{"@value":"Bismethomyl thioether","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"Bismethomyl thioether","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… group_key=thiodicarb||dimension=Environmental > media=Air > indoor=Unknown; cas=59669-26-0; added Common Chemistry CAS names as altLabel: 6-Oxa-3,9-dithia-2,4,7-triazadec-7-enoic acid, 2,4,8-trimethyl-5-oxo-, [1-(methylthio)ethylidene]azanyl ester, CGA 45156, Dicarbasulf, Ethanimidothioic acid, <em>N</em>,<em>N</em>′-[thiobis[(methylimino)carbonyloxy]]bis-, dimethyl ester, Larvin, Lepicron, Liushuanwei, Semevin, UC 51762; object_uuid=fo-b21aec259099a23f
272,601 consensus_match cas_match_labels {"59669-26-0":"exactMatch"} group_key=thiodicarb||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'59669-26-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b21aec259099a23f: {'59669-26-0': 'exactMatch'}
275,298 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14N4O4S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14N4O4S… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '6-Oxa-3,9-dithia-2,4,7-triazadec-7-enoic acid, 2,4,8-trimethyl-5-oxo-, [1-(methylthio)ethylidene]azanyl ester'
281,802 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H14N4O4S… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18N4O4… rdkit_post_consensus from 'CSC(C)=NOC(=O)N(C)SN(C)C(=O)ON=C(C)SC'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string
286,685 withhold_contradicted_composition properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18N4O4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18N4O4… withhold_contradicted_composition: the registry registers [(('C', 10), ('N', 4), ('O', 4), ('S', 3))], contradicting ['C8H14N4O4S3'] from ['enrich_references.chebi_semantic']; withdrew inchi2d_key_string x1, molecular_formula x1, molecular_mass x1, monoisotopic_mass x1
288,619 strip_catalogue_altlabels altLabel [{"@value":"Bismethomyl thioether","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… [{"@value":"Bismethomyl thioether","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribut… Removed 2 catalogue altLabel value(s): 'CGA 45156' (grade code), 'UC 51762' (grade code)
328,739 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
389,601 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18N4O4… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C10H18N4O4… typed the way the ontology types it
396,813 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,814 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/6593 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v1
ef:activity/change/20260820T0738569779880000/6594 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v2
ef:activity/change/20260820T0738569779880000/21805 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v3
ef:activity/change/20260820T0738569779880000/95442 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v4
ef:activity/change/20260820T0738569779880000/95443 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v5
ef:activity/change/20260820T0738569779880000/215547 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v6
ef:activity/change/20260820T0738569779880000/222613 prefLabel ef:agent/normalize_name_case ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v7
ef:activity/change/20260820T0738569779880000/233515 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v8
ef:activity/change/20260820T0738569779880000/233516 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v9
ef:activity/change/20260820T0738569779880000/233517 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v10
ef:activity/change/20260820T0738569779880000/250147 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v11
ef:activity/change/20260820T0738569779880000/255197 altLabel ef:agent/chebi_altlabels ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v12
ef:activity/change/20260820T0738569779880000/272600 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v13
ef:activity/change/20260820T0738569779880000/272601 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v14
ef:activity/change/20260820T0738569779880000/275298 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v15
ef:activity/change/20260820T0738569779880000/281802 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v16
ef:activity/change/20260820T0738569779880000/286685 properties ef:agent/withhold_contradicted_composition ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v17
ef:activity/change/20260820T0738569779880000/288619 altLabel ef:agent/strip_catalogue_altlabels ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v18
ef:activity/change/20260820T0738569779880000/328739 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v19
ef:activity/change/20260820T0738569779880000/389601 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v20
ef:activity/change/20260820T0738569779880000/396813 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v20 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v21
ef:activity/change/20260820T0738569779880000/396814 roles ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v21 ef:flow/4d9a8790-3ddd-11dd-9c98-0050c2490048/v22

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