Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 58985' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=512-56-1; cc_chebi_agreed_name='Trimethyl phosphate'; object_uuid=fo-8d4f375970dc93ff
cas_match_labels 1 consensus_match group_key=trimethylphosphate||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'512-56-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8d4f375970dc93ff: {'512-56-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['512-56-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_46324']; candidate_pubchem_cids=[10541]; selected_pubchem_cids=[10541]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
11,603 bootstrap_labels prefLabel [{"@value":"trimethylphosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Bootstrapped prefLabel from legacy name field
11,604 bootstrap_labels name trimethylphosphate Purged legacy name field to enforce prefLabel usage
11,605 bootstrap_labels synonyms ["AC1L1VF1","AC1Q6SF8","METHYL PHOSPHATE","Methyl phosphate, (MeO)3PO","NCI-C03781","O,O,O-Trimethyl phosphate","P0271"… [] Removed legacy synonyms field in favor of structured labels
95,760 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
95,761 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
217,187 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,789 normalize_name_case prefLabel [{"@value":"trimethylphosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Trimethylphosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
238,224 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
238,225 enrich_references skos_definition [{"@value":"A trialkyl phosphate that is the trimethyl ester of phosphoric acid.","@language":"en","provenance":{"prov:… Merged ChEBI/PubChem definitions into skos:definition
238,226 enrich_references references [] [{"@id":"gmelin:49926","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… Added references with provenance; cas_numbers=['512-56-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_46324']; candidate_pubchem_cids=[10541]; selected_pubchem_cids=[10541]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,491 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… rdkit_pre_consensus from 'COP(=O)(OC)OC'; added: monoisotopic_mass
255,983 chebi_altlabels altLabel [] [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
273,009 consensus_match prefLabel [{"@value":"Trimethylphosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributed… [{"@value":"Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributed… cas=512-56-1; cc_chebi_agreed_name='Trimethyl phosphate'; object_uuid=fo-8d4f375970dc93ff
273,010 consensus_match altLabel [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… cas=512-56-1; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-8d4f375970dc93ff
273,011 consensus_match altLabel [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… group_key=trimethylphosphate||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=512-56-1; added Common Chemistry CAS names as altLabel: Methyl phosphate, (MeO)<sub>3</sub>PO, NSC 58985; object_uuid=fo-8d4f375970dc93ff
273,012 consensus_match cas_match_labels {"512-56-1":"exactMatch"} group_key=trimethylphosphate||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'512-56-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-8d4f375970dc93ff: {'512-56-1': 'exactMatch'}
276,669 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Trimethyl phosphate'
283,293 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… rdkit_post_consensus from 'COP(=O)(OC)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,638 strip_catalogue_altlabels altLabel [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… [{"@value":"O,O,O-Trimethyl phosphate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttr… Removed 1 catalogue altLabel value(s): 'NSC 58985' (registry code)
328,871 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
391,017 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9O4P"],… typed the way the ontology types it
398,880 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T0609040591070000/11603 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v1
ef:activity/change/20260821T0609040591070000/11604 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v2
ef:activity/change/20260821T0609040591070000/11605 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v3
ef:activity/change/20260821T0609040591070000/95760 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v4
ef:activity/change/20260821T0609040591070000/95761 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v5
ef:activity/change/20260821T0609040591070000/217187 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v6
ef:activity/change/20260821T0609040591070000/223789 prefLabel ef:agent/normalize_name_case ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v7
ef:activity/change/20260821T0609040591070000/238224 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v8
ef:activity/change/20260821T0609040591070000/238225 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v9
ef:activity/change/20260821T0609040591070000/238226 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v10
ef:activity/change/20260821T0609040591070000/251491 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v11
ef:activity/change/20260821T0609040591070000/255983 altLabel ef:agent/chebi_altlabels ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v12
ef:activity/change/20260821T0609040591070000/273009 prefLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v13
ef:activity/change/20260821T0609040591070000/273010 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v14
ef:activity/change/20260821T0609040591070000/273011 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v15
ef:activity/change/20260821T0609040591070000/273012 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v16
ef:activity/change/20260821T0609040591070000/276669 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v17
ef:activity/change/20260821T0609040591070000/283293 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v18
ef:activity/change/20260821T0609040591070000/289638 altLabel ef:agent/strip_catalogue_altlabels ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v19
ef:activity/change/20260821T0609040591070000/328871 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v20
ef:activity/change/20260821T0609040591070000/391017 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v20 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v21
ef:activity/change/20260821T0609040591070000/398880 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v21 ef:flow/4d9a8790-3ddd-11dd-9d3a-0050c2490048/v22

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