Warfarin
Everything that changed this flow. Back to the flow
4d9a8790-3ddd-11dd-9d98-0050c2490048
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 4 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 3 catalogue altLabel value(s): 'NSC 59813' (registry code), 'Warf 10' (grade code), 'Warf 5' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=warfarin||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'81-81-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e68613070d72a3d4: {'81-81-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['81-81-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_10033']; candidate_pubchem_cids=[5001396, 54678486, 54684598, 54688261, 126963599]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 6,805 | bootstrap_labels | prefLabel | — | [{"@value":"warfarin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Bootstrapped prefLabel from legacy name field |
| 6,806 | bootstrap_labels | name | warfarin | — | Purged legacy name field to enforce prefLabel usage |
| 6,807 | bootstrap_labels | synonyms | ["(-)-Warfarin","(Phenyl-1 acetyl-2 ethyl) 3-hydroxy-4 coumarine","(S)-4-Hydroxy-3-(3-oxo-1-phenylbutyl)-2-benzopyrone"… | [] | Removed legacy synonyms field in favor of structured labels |
| 95,954 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 95,955 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 215,616 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,664 | normalize_name_case | prefLabel | [{"@value":"warfarin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | [{"@value":"Warfarin","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 233,715 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0) |
| 233,716 | enrich_references | skos_definition | — | [{"@value":"A racemate comprising equal amounts of (R)- and (S)-warfarin. Extensively used as both an anticoagulant dru… | Merged ChEBI/PubChem definitions into skos:definition |
| 233,717 | enrich_references | references | [] | [{"@id":"foodb.food:FDB022750","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedT… | Added references with provenance; cas_numbers=['81-81-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_10033']; candidate_pubchem_cids=[5001396, 54678486, 54684598, 54688261, 126963599]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 255,230 | chebi_altlabels | altLabel | [] | [{"@value":"(+-)-warfarin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | Added 27 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 273,279 | consensus_match | altLabel | [{"@value":"(+-)-warfarin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | [{"@value":"(+-)-warfarin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | group_key=warfarin||dimension=Environmental > media=Water > water_body=Surface water; cas=81-81-2; added Common Chemistry CAS names as altLabel: (±)-Warfarin, (±)-Warfarin-alcohol, 1-(4′-Hydroxy-3′-coumarinyl)-1-phenyl-3-butanone, 2<em>H</em>-1-Benzopyran-2-one, 4-hydroxy-3-(3-oxo-1-phenylbutyl)-, 3-(1′-Phenyl-2′-acetylethyl)-4-hydroxycoumarin, 3-(α-Acetonylbenzyl)-4-hydroxycoumarin, 3-(α-Phenyl-β-acetylethyl)-4-hydroxycoumarin, 4-Hydroxy-3-(3-oxo-1-phenylbutyl)-2<em>H</em>-1-benzopyran-2-one, 4-Hydroxy-3-(3-oxo-1-phenylbutyl)-2<em>H</em>-chromen-2-one, <span class="text-smallcaps">DL</span>-3-(α-Acetonylbenzyl)-4-hydroxycoumarin, Athrombine-K, Circuvit, Co-Rax, Compound 42, Coumafen, Coumaphen, Coumarin, 3-(α-acetonylbenzyl)-4-hydroxy-, Coumefene, Dethmor, Kumader, Martefarin, MeSH ID: D014859, NSC 59813, Ratron G, Rodafarin C, Rodex, Temus W, Vampirinip II, Vampirinip III, W.A.R.F. 42, WARF compound 42, Warf 5, Warfarin acid; object_uuid=fo-e68613070d72a3d4 |
| 273,280 | consensus_match | cas_match_labels | — | {"81-81-2":"exactMatch"} | group_key=warfarin||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'81-81-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-e68613070d72a3d4: {'81-81-2': 'exactMatch'} |
| 275,359 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '4-hydroxy-3-[(1RS)-3-oxo-1-phenylbutyl]-2H-1-benzopyran-2-one' |
| 281,867 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | rdkit_post_consensus from 'CC(=O)CC(c1ccccc1)c1c(O)c2ccccc2oc1=O'; added: inchi2d_key_string, monoisotopic_mass; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass |
| 288,669 | strip_catalogue_altlabels | altLabel | [{"@value":"(+-)-warfarin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | [{"@value":"(+-)-warfarin","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"c… | Removed 3 catalogue altLabel value(s): 'NSC 59813' (registry code), 'Warf 10' (grade code), 'Warf 5' (grade code) |
| 328,995 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… | associations resolved on the elementary layer |
| 389,663 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H16O4"]… | typed the way the ontology types it |
| 396,901 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,902 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_25944","rdfs:label":"pesticide","http://www.w3.org/2004/02/skos/core#defi… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1416470405690000/6805 | prefLabel | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v0 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v1 |
| ef:activity/change/20260820T1416470405690000/6806 | name | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v1 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v2 |
| ef:activity/change/20260820T1416470405690000/6807 | synonyms | ef:agent/bootstrap_labels | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v2 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v3 |
| ef:activity/change/20260820T1416470405690000/95954 | context | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v3 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v4 |
| ef:activity/change/20260820T1416470405690000/95955 | context_iri | ef:agent/default_context_mapping | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v4 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v5 |
| ef:activity/change/20260820T1416470405690000/215616 | unit_iri | ef:agent/unit_normalization | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v5 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v6 |
| ef:activity/change/20260820T1416470405690000/222664 | prefLabel | ef:agent/normalize_name_case | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v6 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v7 |
| ef:activity/change/20260820T1416470405690000/233715 | properties | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v7 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v8 |
| ef:activity/change/20260820T1416470405690000/233716 | skos_definition | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v8 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v9 |
| ef:activity/change/20260820T1416470405690000/233717 | references | ef:agent/enrich_references | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v9 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v10 |
| ef:activity/change/20260820T1416470405690000/255230 | altLabel | ef:agent/chebi_altlabels | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v10 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v11 |
| ef:activity/change/20260820T1416470405690000/273279 | altLabel | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v11 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v12 |
| ef:activity/change/20260820T1416470405690000/273280 | cas_match_labels | ef:agent/consensus_match | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v12 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v13 |
| ef:activity/change/20260820T1416470405690000/275359 | properties | ef:agent/opsin_iupac | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v13 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v14 |
| ef:activity/change/20260820T1416470405690000/281867 | properties | ef:agent/rdkit_post_consensus | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v14 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v15 |
| ef:activity/change/20260820T1416470405690000/288669 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v15 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v16 |
| ef:activity/change/20260820T1416470405690000/328995 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v16 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v17 |
| ef:activity/change/20260820T1416470405690000/389663 | properties | ef:agent/normalise_property_values | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v17 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v18 |
| ef:activity/change/20260820T1416470405690000/396901 | types | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v18 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v19 |
| ef:activity/change/20260820T1416470405690000/396902 | roles | ef:agent/link_flows_to_their_substance | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v19 | ef:flow/4d9a8790-3ddd-11dd-9d98-0050c2490048/v20 |