Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=zearalenone||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'17924-92-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d6d72e8e3e9b3928: {'17924-92-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 241-864-0 from CAS 17924-92-4
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['17924-92-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_10106']; candidate_pubchem_cids=[165628, 442549, 736301, 5281576, 5375083, 6433708, 12445020, 13829024, 40468642, 44135005]; selected_pubchem_cids=[5281576]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
6,814 bootstrap_labels prefLabel [{"@value":"zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
6,815 bootstrap_labels name zearalenone Purged legacy name field to enforce prefLabel usage
6,816 bootstrap_labels synonyms ["(-)-(3S,11E)-3,4,5,6,9,10-hexahydro-14,16-dihydroxy-3-methyl-1H-2-benzoxacyclotetradecin-1, 7(8H)-dione","(-)-(3S,11E… [] Removed legacy synonyms field in favor of structured labels
95,976 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
95,977 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified
215,613 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
222,660 normalize_name_case prefLabel [{"@value":"zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
226,783 ec_cross_check ec_numbers [] ["241-864-0"] Resolved from EC-inventory: 241-864-0 from CAS 17924-92-4
233,716 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
233,717 enrich_references skos_definition [{"@value":"A macrolide comprising a fourteen-membered lactone fused to 1,3-dihydroxybenzene; a potent estrogenic metab… Merged ChEBI/PubChem definitions into skos:definition
233,718 enrich_references references [] [{"@id":"agr:IND608145868","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['17924-92-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_10106']; candidate_pubchem_cids=[165628, 442549, 736301, 5281576, 5375083, 6433708, 12445020, 13829024, 40468642, 44135005]; selected_pubchem_cids=[5281576]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
250,200 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… rdkit_pre_consensus from 'CC1CCCC(=O)CCCC=CC2=C(C(=CC(=C2)O)O)C(=O)O1'; added: inchi2d_string, monoisotopic_mass
255,223 chebi_altlabels altLabel [] [{"@value":"(-)-Zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
273,295 consensus_match altLabel [{"@value":"(-)-Zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"(-)-Zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… group_key=zearalenone||dimension=Environmental > media=Ground > geography=Agricultural; cas=17924-92-4; added Common Chemistry CAS names as altLabel: (3<em>S</em>,11<em>E</em>)-3,4,5,6,9,10-Hexahydro-14,16-dihydroxy-3-methyl-1<em>H</em>-2-benzoxacyclotetradecin-1,7(8<em>H</em>)-dione, 1<em>H</em>-2-Benzoxacyclotetradecin-1,7(8<em>H</em>)-dione, 3,4,5,6,9,10-hexahydro-14,16-dihydroxy-3-methyl-, (3<em>S</em>,11<em>E</em>)-, 1<em>H</em>-2-Benzoxacyclotetradecin-1,7(8<em>H</em>)-dione, 3,4,5,6,9,10-hexahydro-14,16-dihydroxy-3-methyl-, (<em>S</em>)-(-)-, 1<em>H</em>-2-Benzoxacyclotetradecin-1,7(8<em>H</em>)-dione, 3,4,5,6,9,10-hexahydro-14,16-dihydroxy-3-methyl-, [<em>S</em>-(<em>E</em>)]-, 6-(10-Hydroxy-6-oxo-<em>trans</em>-1-undecenyl)-β-resorcylic acid lactone, MeSH ID: D015025, Mycotoxin F 2, Toxin F<sub>2</sub>, Zenone; object_uuid=fo-d6d72e8e3e9b3928
273,296 consensus_match cas_match_labels {"17924-92-4":"exactMatch"} group_key=zearalenone||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'17924-92-4': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-d6d72e8e3e9b3928: {'17924-92-4': 'exactMatch'}
275,341 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(3S,11E)-14,16-dihydroxy-3-methyl-3,4,5,6,9,10-hexahydro-1H-2-benzoxacyclotetradecine-1,7(8H)-dione'
281,851 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… rdkit_post_consensus from 'C[C@H]1CCCC(=O)CCC/C=C/c2cc(O)cc(O)c2C(=O)O1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,332 dedupe_altlabels altLabel [{"@value":"(-)-Zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"(-)-Zearalenone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Deduplicated altLabel values and removed entries matching prefLabel
328,986 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/4d9a8790-3ddd-… associations resolved on the elementary layer
389,644 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… typed the way the ontology types it
396,883 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
396,884 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C18H22O5"]… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/6814 prefLabel ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v0 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v1
ef:activity/change/20260821T1302361922970000/6815 name ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v1 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v2
ef:activity/change/20260821T1302361922970000/6816 synonyms ef:agent/bootstrap_labels ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v2 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v3
ef:activity/change/20260821T1302361922970000/95976 context ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v3 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v4
ef:activity/change/20260821T1302361922970000/95977 context_iri ef:agent/default_context_mapping ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v4 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v5
ef:activity/change/20260821T1302361922970000/215613 unit_iri ef:agent/unit_normalization ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v5 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v6
ef:activity/change/20260821T1302361922970000/222660 prefLabel ef:agent/normalize_name_case ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v6 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v7
ef:activity/change/20260821T1302361922970000/226783 ec_numbers ef:agent/ec_cross_check ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v7 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v8
ef:activity/change/20260821T1302361922970000/233716 properties ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v8 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v9
ef:activity/change/20260821T1302361922970000/233717 skos_definition ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v9 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v10
ef:activity/change/20260821T1302361922970000/233718 references ef:agent/enrich_references ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v10 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v11
ef:activity/change/20260821T1302361922970000/250200 properties ef:agent/rdkit_pre_consensus ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v11 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v12
ef:activity/change/20260821T1302361922970000/255223 altLabel ef:agent/chebi_altlabels ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v12 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v13
ef:activity/change/20260821T1302361922970000/273295 altLabel ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v13 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v14
ef:activity/change/20260821T1302361922970000/273296 cas_match_labels ef:agent/consensus_match ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v14 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v15
ef:activity/change/20260821T1302361922970000/275341 properties ef:agent/opsin_iupac ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v15 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v16
ef:activity/change/20260821T1302361922970000/281851 properties ef:agent/rdkit_post_consensus ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v16 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v17
ef:activity/change/20260821T1302361922970000/292332 altLabel ef:agent/dedupe_altlabels ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v17 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v18
ef:activity/change/20260821T1302361922970000/328986 concept_associations ef:agent/carry_associations_onto_flows ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v18 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v19
ef:activity/change/20260821T1302361922970000/389644 properties ef:agent/normalise_property_values ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v19 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v20
ef:activity/change/20260821T1302361922970000/396883 types ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v20 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v21
ef:activity/change/20260821T1302361922970000/396884 properties ef:agent/link_flows_to_their_substance ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v21 ef:flow/4d9a8790-3ddd-11dd-9da6-0050c2490048/v22

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