Vanillic Acid
Everything that changed this flow. Back to the flow
5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'NSC 3987' (registry code), 'NSC 674322' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=vanillicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'121-34-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c1084352ab7f8165: {'121-34-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['121-34-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30816']; candidate_pubchem_cids=[8468, 602320, 54675858]; selected_pubchem_cids=[8468]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 18,475 | bootstrap_labels | prefLabel | — | [{"@value":"vanillic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 18,476 | bootstrap_labels | name | vanillic acid | — | Purged legacy name field to enforce prefLabel usage |
| 18,477 | bootstrap_labels | synonyms | ["3-Methoxy-4-hydroxybenzoic acid","4 Hydroxy 3 methoxybenzoic Acid","4-HYDROXY-3-METHOXYBENZOIC ACID","4-Hydroxy-3-met… | [] | Removed legacy synonyms field in favor of structured labels |
| 97,726 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Ocean"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 97,727 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-ocea | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to sea water |
| 219,377 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,303 | normalize_name_case | prefLabel | [{"@value":"vanillic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Vanillic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 244,436 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 244,437 | enrich_references | skos_definition | — | [{"@value":"A monohydroxybenzoic acid that is 4-hydroxybenzoic acid substituted by a methoxy group at position 3.","@la… | Merged ChEBI/PubChem definitions into skos:definition |
| 244,438 | enrich_references | references | [] | [{"@id":"beilstein:2208364","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['121-34-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30816']; candidate_pubchem_cids=[8468, 602320, 54675858]; selected_pubchem_cids=[8468]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,291 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | rdkit_pre_consensus from 'COC1=C(C=CC(=C1)C(=O)O)O'; added: monoisotopic_mass |
| 256,804 | chebi_altlabels | altLabel | [] | [{"@value":"4-Hydroxy-3-methoxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 273,227 | consensus_match | altLabel | [{"@value":"4-Hydroxy-3-methoxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | [{"@value":"4-Hydroxy-3-methoxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | group_key=vanillicacid||dimension=Environmental > media=Ground > geography=Agricultural; cas=121-34-6; added Common Chemistry CAS names as altLabel: 2-Methoxy-4-carboxyphenol, 3-Methoxy-4-hydroxybenzoic acid, 4-Carboxyl-2-methoxyphenol, <em>m</em>-Methoxy-<em>p</em>-hydroxy-benzoic acid, Benzoic acid, 4-hydroxy-3-methoxy-, MeSH ID: D014641, Methylprotocatechuic acid, NSC 3987, NSC 674322, VA; object_uuid=fo-c1084352ab7f8165 |
| 273,228 | consensus_match | cas_match_labels | — | {"121-34-6":"exactMatch"} | group_key=vanillicacid||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'121-34-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-c1084352ab7f8165: {'121-34-6': 'exactMatch'} |
| 278,498 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Vanillic Acid' |
| 285,265 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | rdkit_post_consensus from 'COc1cc(C(=O)O)ccc1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,969 | strip_catalogue_altlabels | altLabel | [{"@value":"4-Hydroxy-3-methoxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | [{"@value":"4-Hydroxy-3-methoxybenzoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | Removed 2 catalogue altLabel value(s): 'NSC 3987' (registry code), 'NSC 674322' (registry code) |
| 329,858 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/5070c95c-3778-… | associations resolved on the elementary layer |
| 392,866 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H8O4"],"… | typed the way the ontology types it |
| 401,539 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1122181958110000/18475 | prefLabel | ef:agent/bootstrap_labels | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v0 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v1 |
| ef:activity/change/20260821T1122181958110000/18476 | name | ef:agent/bootstrap_labels | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v1 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v2 |
| ef:activity/change/20260821T1122181958110000/18477 | synonyms | ef:agent/bootstrap_labels | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v2 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v3 |
| ef:activity/change/20260821T1122181958110000/97726 | context | ef:agent/default_context_mapping | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v3 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v4 |
| ef:activity/change/20260821T1122181958110000/97727 | context_iri | ef:agent/default_context_mapping | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v4 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v5 |
| ef:activity/change/20260821T1122181958110000/219377 | unit_iri | ef:agent/unit_normalization | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v5 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v6 |
| ef:activity/change/20260821T1122181958110000/225303 | prefLabel | ef:agent/normalize_name_case | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v6 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v7 |
| ef:activity/change/20260821T1122181958110000/244436 | properties | ef:agent/enrich_references | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v7 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v8 |
| ef:activity/change/20260821T1122181958110000/244437 | skos_definition | ef:agent/enrich_references | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v8 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v9 |
| ef:activity/change/20260821T1122181958110000/244438 | references | ef:agent/enrich_references | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v9 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v10 |
| ef:activity/change/20260821T1122181958110000/253291 | properties | ef:agent/rdkit_pre_consensus | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v10 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v11 |
| ef:activity/change/20260821T1122181958110000/256804 | altLabel | ef:agent/chebi_altlabels | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v11 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v12 |
| ef:activity/change/20260821T1122181958110000/273227 | altLabel | ef:agent/consensus_match | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v12 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v13 |
| ef:activity/change/20260821T1122181958110000/273228 | cas_match_labels | ef:agent/consensus_match | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v13 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v14 |
| ef:activity/change/20260821T1122181958110000/278498 | properties | ef:agent/opsin_iupac | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v14 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v15 |
| ef:activity/change/20260821T1122181958110000/285265 | properties | ef:agent/rdkit_post_consensus | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v15 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v16 |
| ef:activity/change/20260821T1122181958110000/290969 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v16 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v17 |
| ef:activity/change/20260821T1122181958110000/329858 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v17 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v18 |
| ef:activity/change/20260821T1122181958110000/392866 | properties | ef:agent/normalise_property_values | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v18 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v19 |
| ef:activity/change/20260821T1122181958110000/401539 | types | ef:agent/link_flows_to_their_substance | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v19 | ef:flow/5070c95c-3778-4ffb-a8f4-1a5cd4b2eb83/v20 |