Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 2 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=ureaphosphate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['ec_inventory']; cas_sources={'4861-19-2': ['ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-be5dd9b1d493d5a8: {'4861-19-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['4861-19-2']; matched_chebi_ids=[]; candidate_pubchem_cids=[20994]; selected_pubchem_cids=[20994]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
15,998 bootstrap_labels prefLabel [{"@value":"urea phosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Bootstrapped prefLabel from legacy name field
15,999 bootstrap_labels name urea phosphate Purged legacy name field to enforce prefLabel usage
16,000 bootstrap_labels synonyms ["inorganic","ureaphosphate","multi-up","up17.5-44-0","ureaphosphatesalt","urea,phosphate(1:1)"] [] Removed legacy synonyms field in favor of structured labels
99,306 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
99,307 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
218,596 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,771 normalize_name_case prefLabel [{"@value":"urea phosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… [{"@value":"Urea Phosphate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
242,246 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1)
242,247 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
242,248 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.022.305","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['4861-19-2']; matched_chebi_ids=[]; candidate_pubchem_cids=[20994]; selected_pubchem_cids=[20994]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,661 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… rdkit_pre_consensus from 'C(=O)(N)N.OP(=O)(O)O'; added: molecular_mass, monoisotopic_mass
273,199 consensus_match altLabel [] [{"@value":"Bepikor 1","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… group_key=ureaphosphate||dimension=Environmental > media=Water > water_body=Ocean; cas=4861-19-2; added Common Chemistry CAS names as altLabel: Bepikor 1, Carbamide phosphoric acid, Urea compd. with phosphoric acid (1:1), Urea dihydrogen phosphate, Urea monophosphate, Urea orthophosphate, Urea, compd. with H<sub>3</sub>PO<sub>4</sub>, Urea, phosphate (1:1); object_uuid=fo-be5dd9b1d493d5a8
273,200 consensus_match cas_match_labels {"4861-19-2":"exactMatch"} group_key=ureaphosphate||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['ec_inventory']; cas_sources={'4861-19-2': ['ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-be5dd9b1d493d5a8: {'4861-19-2': 'exactMatch'}
277,868 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Urea Phosphate'
284,577 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… rdkit_post_consensus from 'NC(N)=O.O=P(O)(O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,855 dedupe_altlabels altLabel [{"@value":"Bepikor 1","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… [{"@value":"Bepikor 1","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… Deduplicated altLabel values and removed entries matching prefLabel
330,650 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/531a1b49-c5a5-… associations resolved on the elementary layer
392,224 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH7N2O5P"]… typed the way the ontology types it
400,580 link_flows_to_their_substance types ["https://w3id.org/chemrof/MolecularComplex"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/15998 prefLabel ef:agent/bootstrap_labels ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v0 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v1
ef:activity/change/20260821T1554374006150000/15999 name ef:agent/bootstrap_labels ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v1 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v2
ef:activity/change/20260821T1554374006150000/16000 synonyms ef:agent/bootstrap_labels ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v2 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v3
ef:activity/change/20260821T1554374006150000/99306 context ef:agent/default_context_mapping ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v3 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v4
ef:activity/change/20260821T1554374006150000/99307 context_iri ef:agent/default_context_mapping ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v4 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v5
ef:activity/change/20260821T1554374006150000/218596 unit_iri ef:agent/unit_normalization ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v5 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v6
ef:activity/change/20260821T1554374006150000/224771 prefLabel ef:agent/normalize_name_case ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v6 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v7
ef:activity/change/20260821T1554374006150000/242246 properties ef:agent/enrich_references ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v7 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v8
ef:activity/change/20260821T1554374006150000/242247 skos_definition ef:agent/enrich_references ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v8 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v9
ef:activity/change/20260821T1554374006150000/242248 references ef:agent/enrich_references ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v9 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v10
ef:activity/change/20260821T1554374006150000/252661 properties ef:agent/rdkit_pre_consensus ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v10 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v11
ef:activity/change/20260821T1554374006150000/273199 altLabel ef:agent/consensus_match ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v11 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v12
ef:activity/change/20260821T1554374006150000/273200 cas_match_labels ef:agent/consensus_match ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v12 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v13
ef:activity/change/20260821T1554374006150000/277868 properties ef:agent/opsin_iupac ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v13 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v14
ef:activity/change/20260821T1554374006150000/284577 properties ef:agent/rdkit_post_consensus ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v14 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v15
ef:activity/change/20260821T1554374006150000/292855 altLabel ef:agent/dedupe_altlabels ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v15 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v16
ef:activity/change/20260821T1554374006150000/330650 concept_associations ef:agent/carry_associations_onto_flows ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v16 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v17
ef:activity/change/20260821T1554374006150000/392224 properties ef:agent/normalise_property_values ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v17 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v18
ef:activity/change/20260821T1554374006150000/400580 types ef:agent/link_flows_to_their_substance ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v18 ef:flow/531a1b49-c5a5-435e-81be-6631631a822c/v19

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