Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'NAA 60' (grade code), 'NSC 35598' (registry code), 'NSC 8266' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=hexanoicacid||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'142-62-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-04fb3940a1007b35: {'142-62-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['142-62-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30776']; candidate_pubchem_cids=[8892, 4398339, 23616664]; selected_pubchem_cids=[8892]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
10,846 bootstrap_labels prefLabel [{"@value":"hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Bootstrapped prefLabel from legacy name field
10,847 bootstrap_labels name hexanoic acid Purged legacy name field to enforce prefLabel usage
10,848 bootstrap_labels synonyms ["(C5-C9) Monobasic acids","(C6-C12) Alkylcarboxylic acid","(C6-C12)Alkylcarboxylic acid","1-Hexanoic acid","1-Pentanec… [] Removed legacy synonyms field in favor of structured labels
100,064 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
100,065 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
216,936 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,626 normalize_name_case prefLabel [{"@value":"hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Hexanoic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
237,501 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
237,502 enrich_references skos_definition [{"@value":"A C6, straight-chain saturated fatty acid.","@language":"en","provenance":{"prov:wasGeneratedBy":"enrich_re… Merged ChEBI/PubChem definitions into skos:definition
237,503 enrich_references references [] [{"@id":"ecmdb:ECMDB21229","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['142-62-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30776']; candidate_pubchem_cids=[8892, 4398339, 23616664]; selected_pubchem_cids=[8892]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
255,908 chebi_altlabels altLabel [] [{"@value":"1-hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Added 18 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
267,699 consensus_match altLabel [{"@value":"1-hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"1-hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… group_key=hexanoicacid||dimension=Environmental > media=Air > strata=Unknown; cas=142-62-1; added Common Chemistry CAS names as altLabel: NAA 60, NSC 35598, NSC 8266; object_uuid=fo-04fb3940a1007b35
267,700 consensus_match cas_match_labels {"142-62-1":"exactMatch"} group_key=hexanoicacid||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'142-62-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-04fb3940a1007b35: {'142-62-1': 'exactMatch'}
276,464 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Hexanoic Acid'
283,070 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… rdkit_post_consensus from 'CCCCCC(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,511 strip_catalogue_altlabels altLabel [{"@value":"1-hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… [{"@value":"1-hexanoic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… Removed 3 catalogue altLabel value(s): 'NAA 60' (grade code), 'NSC 35598' (registry code), 'NSC 8266' (registry code)
331,029 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/54771592-07df-… associations resolved on the elementary layer
390,819 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… typed the way the ontology types it
398,600 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/10846 prefLabel ef:agent/bootstrap_labels ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v0 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v1
ef:activity/change/20260822T0600486828500000/10847 name ef:agent/bootstrap_labels ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v1 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v2
ef:activity/change/20260822T0600486828500000/10848 synonyms ef:agent/bootstrap_labels ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v2 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v3
ef:activity/change/20260822T0600486828500000/100064 context ef:agent/default_context_mapping ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v3 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v4
ef:activity/change/20260822T0600486828500000/100065 context_iri ef:agent/default_context_mapping ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v4 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v5
ef:activity/change/20260822T0600486828500000/216936 unit_iri ef:agent/unit_normalization ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v5 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v6
ef:activity/change/20260822T0600486828500000/223626 prefLabel ef:agent/normalize_name_case ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v6 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v7
ef:activity/change/20260822T0600486828500000/237501 properties ef:agent/enrich_references ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v7 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v8
ef:activity/change/20260822T0600486828500000/237502 skos_definition ef:agent/enrich_references ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v8 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v9
ef:activity/change/20260822T0600486828500000/237503 references ef:agent/enrich_references ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v9 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v10
ef:activity/change/20260822T0600486828500000/255908 altLabel ef:agent/chebi_altlabels ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v10 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v11
ef:activity/change/20260822T0600486828500000/267699 altLabel ef:agent/consensus_match ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v11 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v12
ef:activity/change/20260822T0600486828500000/267700 cas_match_labels ef:agent/consensus_match ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v12 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v13
ef:activity/change/20260822T0600486828500000/276464 properties ef:agent/opsin_iupac ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v13 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v14
ef:activity/change/20260822T0600486828500000/283070 properties ef:agent/rdkit_post_consensus ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v14 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v15
ef:activity/change/20260822T0600486828500000/289511 altLabel ef:agent/strip_catalogue_altlabels ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v15 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v16
ef:activity/change/20260822T0600486828500000/331029 concept_associations ef:agent/carry_associations_onto_flows ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v16 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v17
ef:activity/change/20260822T0600486828500000/390819 properties ef:agent/normalise_property_values ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v17 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v18
ef:activity/change/20260822T0600486828500000/398600 types ef:agent/link_flows_to_their_substance ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v18 ef:flow/54771592-07df-4583-9935-bde4cbb002fd/v19

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