Pyridine-2,6-dicarboxylic Acid
Everything that changed this flow. Back to the flow
55855174-10e0-4549-9782-b8d58e473eac
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 176' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=pyridine-2,6-dicarboxylicacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'499-83-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ef96099300a9c89e: {'499-83-2': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['499-83-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_46837']; candidate_pubchem_cids=[10367, 74567, 557515]; selected_pubchem_cids=[10367]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 20,250 | bootstrap_labels | prefLabel | — | [{"@value":"pyridine-2,6-dicarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:w… | Bootstrapped prefLabel from legacy name field |
| 20,251 | bootstrap_labels | name | pyridine-2,6-dicarboxylic acid | — | Purged legacy name field to enforce prefLabel usage |
| 20,252 | bootstrap_labels | synonyms | ["2,6-Dicarboxypyridine","2,6-Dipicolinic acid","2,6-Pyridinedicarboxylic acid","2,6-Pyridinedicarboxylicacid","2,6-pyr… | [] | Removed legacy synonyms field in favor of structured labels |
| 100,695 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 100,696 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 219,907 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,685 | normalize_name_case | prefLabel | [{"@value":"pyridine-2,6-dicarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:w… | [{"@value":"Pyridine-2,6-dicarboxylic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:w… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 245,915 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 245,916 | enrich_references | skos_definition | — | [{"@value":"A pyridinedicarboxylic acid carrying two carboxy groups at positions 2 and 6.","@language":"en","provenance… | Merged ChEBI/PubChem definitions into skos:definition |
| 245,917 | enrich_references | references | [] | [{"@id":"gmelin:50798","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"brig… | Added references with provenance; cas_numbers=['499-83-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_46837']; candidate_pubchem_cids=[10367, 74567, 557515]; selected_pubchem_cids=[10367]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,722 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | rdkit_pre_consensus from 'C1=CC(=NC(=C1)C(=O)O)C(=O)O'; added: monoisotopic_mass |
| 256,995 | chebi_altlabels | altLabel | [] | [{"@value":"2,6-Dipicolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 271,215 | consensus_match | altLabel | [{"@value":"2,6-Dipicolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | [{"@value":"2,6-Dipicolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | group_key=pyridine-2,6-dicarboxylicacid||dimension=Environmental > media=Air > strata=Long-term; cas=499-83-2; added Common Chemistry CAS names as altLabel: 2,6-PDA, 6-Carboxypicolinic acid, DPA, DPAc, NSC 176, Pyridine-2,6-diformic acid; object_uuid=fo-ef96099300a9c89e |
| 271,216 | consensus_match | cas_match_labels | — | {"499-83-2":"exactMatch"} | group_key=pyridine-2,6-dicarboxylicacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'499-83-2': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-ef96099300a9c89e: {'499-83-2': 'exactMatch'} |
| 278,936 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Pyridine-2,6-dicarboxylic Acid' |
| 285,745 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | rdkit_post_consensus from 'O=C(O)c1cccc(C(=O)O)n1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,304 | strip_catalogue_altlabels | altLabel | [{"@value":"2,6-Dipicolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | [{"@value":"2,6-Dipicolinic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… | Removed 1 catalogue altLabel value(s): 'NSC 176' (registry code) |
| 331,383 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/55855174-10e0-… | associations resolved on the elementary layer |
| 393,339 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H5NO4"],… | typed the way the ontology types it |
| 402,230 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20261019T0712047113160000/20250 | prefLabel | ef:agent/bootstrap_labels | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v0 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v1 |
| ef:activity/change/20261019T0712047113160000/20251 | name | ef:agent/bootstrap_labels | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v1 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v2 |
| ef:activity/change/20261019T0712047113160000/20252 | synonyms | ef:agent/bootstrap_labels | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v2 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v3 |
| ef:activity/change/20261019T0712047113160000/100695 | context | ef:agent/default_context_mapping | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v3 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v4 |
| ef:activity/change/20261019T0712047113160000/100696 | context_iri | ef:agent/default_context_mapping | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v4 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v5 |
| ef:activity/change/20261019T0712047113160000/219907 | unit_iri | ef:agent/unit_normalization | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v5 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v6 |
| ef:activity/change/20261019T0712047113160000/225685 | prefLabel | ef:agent/normalize_name_case | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v6 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v7 |
| ef:activity/change/20261019T0712047113160000/245915 | properties | ef:agent/enrich_references | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v7 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v8 |
| ef:activity/change/20261019T0712047113160000/245916 | skos_definition | ef:agent/enrich_references | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v8 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v9 |
| ef:activity/change/20261019T0712047113160000/245917 | references | ef:agent/enrich_references | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v9 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v10 |
| ef:activity/change/20261019T0712047113160000/253722 | properties | ef:agent/rdkit_pre_consensus | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v10 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v11 |
| ef:activity/change/20261019T0712047113160000/256995 | altLabel | ef:agent/chebi_altlabels | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v11 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v12 |
| ef:activity/change/20261019T0712047113160000/271215 | altLabel | ef:agent/consensus_match | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v12 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v13 |
| ef:activity/change/20261019T0712047113160000/271216 | cas_match_labels | ef:agent/consensus_match | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v13 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v14 |
| ef:activity/change/20261019T0712047113160000/278936 | properties | ef:agent/opsin_iupac | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v14 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v15 |
| ef:activity/change/20261019T0712047113160000/285745 | properties | ef:agent/rdkit_post_consensus | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v15 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v16 |
| ef:activity/change/20261019T0712047113160000/291304 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v16 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v17 |
| ef:activity/change/20261019T0712047113160000/331383 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v17 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v18 |
| ef:activity/change/20261019T0712047113160000/393339 | properties | ef:agent/normalise_property_values | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v18 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v19 |
| ef:activity/change/20261019T0712047113160000/402230 | types | ef:agent/link_flows_to_their_substance | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v19 | ef:flow/55855174-10e0-4549-9782-b8d58e473eac/v20 |