Iron(3+)
Everything that changed this flow. Back to the flow
57decd6d-2f4e-4ec3-8a97-e42e4539a5e9
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, dedupe_altlabels | Deduplicated altLabel values and removed entries matching prefLabel |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=20074-52-6; cc_chebi_agreed_name='Iron(3+)'; object_uuid=fo-eb2df3c892330e00 |
| cas_match_labels | 1 | consensus_match | group_key=iron(iii)||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'20074-52-6': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-eb2df3c892330e00: {'20074-52-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['20074-52-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29034']; candidate_pubchem_cids=[29936]; selected_pubchem_cids=[29936]; formula_similarity_expected=['Fe']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 21,119 | bootstrap_labels | prefLabel | — | [{"@value":"iron (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 21,120 | bootstrap_labels | name | iron (iii) | — | Purged legacy name field to enforce prefLabel usage |
| 21,121 | bootstrap_labels | synonyms | ["element in usetox"] | [] | Removed legacy synonyms field in favor of structured labels |
| 102,010 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 102,011 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified |
| 220,143 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 225,883 | normalize_name_case | prefLabel | [{"@value":"iron (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Iron (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 246,580 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 246,581 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 246,582 | enrich_references | references | [] | [{"@id":"gmelin:15986","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… | Added references with provenance; cas_numbers=['20074-52-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_29034']; candidate_pubchem_cids=[29936]; selected_pubchem_cids=[29936]; formula_similarity_expected=['Fe']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 253,926 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | rdkit_pre_consensus from '[Fe+3]'; added: monoisotopic_mass |
| 257,068 | chebi_altlabels | altLabel | [] | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 268,047 | consensus_match | prefLabel | [{"@value":"Iron (iii)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Iron(3+)","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"consen… | cas=20074-52-6; cc_chebi_agreed_name='Iron(3+)'; object_uuid=fo-eb2df3c892330e00 |
| 268,048 | consensus_match | altLabel | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | cas=20074-52-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-eb2df3c892330e00 |
| 268,049 | consensus_match | altLabel | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | group_key=iron(iii)||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=20074-52-6; added Common Chemistry CAS names as altLabel: Ferric cation, Iron (Fe<sup>3+</sup>), Iron ion(3+), Iron trivalent ion, Iron(III), Iron(III) ion, Iron, ion (Fe<sup>3+</sup>); object_uuid=fo-eb2df3c892330e00 |
| 268,050 | consensus_match | cas_match_labels | — | {"20074-52-6":"exactMatch"} | group_key=iron(iii)||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'pubchem']; cas_sources={'20074-52-6': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-eb2df3c892330e00: {'20074-52-6': 'exactMatch'} |
| 279,125 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Iron(3+)' |
| 285,976 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | rdkit_post_consensus from '[Fe+3]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 293,133 | dedupe_altlabels | altLabel | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | [{"@value":"FE (III) ION","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… | Deduplicated altLabel values and removed entries matching prefLabel |
| 332,022 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/57decd6d-2f4e-… | associations resolved on the elementary layer |
| 393,521 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | typed the way the ontology types it |
| 402,523 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/AtomCation"] | the substance's answer, copied onto its flow |
| 402,524 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Fe","Fe+3"… | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/21119 | prefLabel | ef:agent/bootstrap_labels | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v0 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v1 |
| ef:activity/change/20260820T0738569779880000/21120 | name | ef:agent/bootstrap_labels | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v1 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v2 |
| ef:activity/change/20260820T0738569779880000/21121 | synonyms | ef:agent/bootstrap_labels | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v2 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v3 |
| ef:activity/change/20260820T0738569779880000/102010 | context | ef:agent/default_context_mapping | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v3 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v4 |
| ef:activity/change/20260820T0738569779880000/102011 | context_iri | ef:agent/default_context_mapping | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v4 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v5 |
| ef:activity/change/20260820T0738569779880000/220143 | unit_iri | ef:agent/unit_normalization | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v5 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v6 |
| ef:activity/change/20260820T0738569779880000/225883 | prefLabel | ef:agent/normalize_name_case | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v6 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v7 |
| ef:activity/change/20260820T0738569779880000/246580 | properties | ef:agent/enrich_references | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v7 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v8 |
| ef:activity/change/20260820T0738569779880000/246581 | skos_definition | ef:agent/enrich_references | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v8 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v9 |
| ef:activity/change/20260820T0738569779880000/246582 | references | ef:agent/enrich_references | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v9 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v10 |
| ef:activity/change/20260820T0738569779880000/253926 | properties | ef:agent/rdkit_pre_consensus | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v10 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v11 |
| ef:activity/change/20260820T0738569779880000/257068 | altLabel | ef:agent/chebi_altlabels | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v11 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v12 |
| ef:activity/change/20260820T0738569779880000/268047 | prefLabel | ef:agent/consensus_match | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v12 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v13 |
| ef:activity/change/20260820T0738569779880000/268048 | altLabel | ef:agent/consensus_match | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v13 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v14 |
| ef:activity/change/20260820T0738569779880000/268049 | altLabel | ef:agent/consensus_match | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v14 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v15 |
| ef:activity/change/20260820T0738569779880000/268050 | cas_match_labels | ef:agent/consensus_match | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v15 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v16 |
| ef:activity/change/20260820T0738569779880000/279125 | properties | ef:agent/opsin_iupac | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v16 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v17 |
| ef:activity/change/20260820T0738569779880000/285976 | properties | ef:agent/rdkit_post_consensus | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v17 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v18 |
| ef:activity/change/20260820T0738569779880000/293133 | altLabel | ef:agent/dedupe_altlabels | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v18 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v19 |
| ef:activity/change/20260820T0738569779880000/332022 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v19 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v20 |
| ef:activity/change/20260820T0738569779880000/393521 | properties | ef:agent/normalise_property_values | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v20 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v21 |
| ef:activity/change/20260820T0738569779880000/402523 | types | ef:agent/link_flows_to_their_substance | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v21 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v22 |
| ef:activity/change/20260820T0738569779880000/402524 | properties | ef:agent/link_flows_to_their_substance | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v22 | ef:flow/57decd6d-2f4e-4ec3-8a97-e42e4539a5e9/v23 |