Consensus flow list

By field

15 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 1203' (registry code), 'NSC 60515' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=ethylmercurychloride||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'107-27-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-12412762c3ebfa12: {'107-27-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
ec_numbers 1 ec_cross_check Resolved from EC-inventory: 203-478-0 from CAS 107-27-7
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['107-27-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_152058']; candidate_pubchem_cids=[7862, 10244589, 101633771]; selected_pubchem_cids=[7862]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
16,357 bootstrap_labels prefLabel [{"@value":"ethylmercury chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Bootstrapped prefLabel from legacy name field
16,358 bootstrap_labels name ethylmercury chloride Purged legacy name field to enforce prefLabel usage
16,359 bootstrap_labels synonyms ["AC1L1PQ0","Ceresan","Chloride, Ethyl Mercury","Chloride, Ethylmercuric","Chloride, Ethylmercury","Chloroethylmercury"… [] Removed legacy synonyms field in favor of structured labels
104,544 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Medium stack, <150 meters","population_density":"Rural (<1000 peop… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
104,545 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-mest15me-ru10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to non-urban air or from high stacks
218,714 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,855 normalize_name_case prefLabel [{"@value":"ethylmercury chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… [{"@value":"Ethylmercury Chloride","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
227,015 ec_cross_check ec_numbers [] ["203-478-0"] Resolved from EC-inventory: 203-478-0 from CAS 107-27-7
242,569 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
242,570 enrich_references skos_definition [{"@value":"A highly toxic organomercury compound which is used as a fungicide for treating seeds.","@language":"en","p… Merged ChEBI/PubChem definitions into skos:definition
242,571 enrich_references references [] [{"@id":"https://chem.echa.europa.eu/100.003.163","provenance":{"prov:wasGeneratedBy":"enrich_references.pubchem_identi… Added references with provenance; cas_numbers=['107-27-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_152058']; candidate_pubchem_cids=[7862, 10244589, 101633771]; selected_pubchem_cids=[7862]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,760 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… rdkit_pre_consensus from 'CC[Hg]Cl'; added: monoisotopic_mass
256,550 chebi_altlabels altLabel [] [{"@value":"C2H5HgCl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Added 16 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
266,974 consensus_match altLabel [{"@value":"C2H5HgCl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"C2H5HgCl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… group_key=ethylmercurychloride||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=107-27-7; added Common Chemistry CAS names as altLabel: Ceresan (fungicide), Criptodin, Cryptodin, Ethylmercuric chloride, MeSH ID: D005034, Mercury, chloroethyl-, NSC 1203, NSC 60515; object_uuid=fo-12412762c3ebfa12
266,975 consensus_match cas_match_labels {"107-27-7":"exactMatch"} group_key=ethylmercurychloride||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'107-27-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-12412762c3ebfa12: {'107-27-7': 'exactMatch'}
277,979 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Ethylmercury Chloride'
284,698 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… rdkit_post_consensus from 'C[CH2][Hg][Cl]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,593 strip_catalogue_altlabels altLabel [{"@value":"C2H5HgCl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"C2H5HgCl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Removed 2 catalogue altLabel value(s): 'NSC 1203' (registry code), 'NSC 60515' (registry code)
333,289 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/5c3743d6-018f-… associations resolved on the elementary layer
392,331 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H5ClHg"]… typed the way the ontology types it
400,739 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,740 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24127","rdfs:label":"fungicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/16357 prefLabel ef:agent/bootstrap_labels ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v0 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v1
ef:activity/change/20260820T1416470405690000/16358 name ef:agent/bootstrap_labels ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v1 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v2
ef:activity/change/20260820T1416470405690000/16359 synonyms ef:agent/bootstrap_labels ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v2 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v3
ef:activity/change/20260820T1416470405690000/104544 context ef:agent/default_context_mapping ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v3 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v4
ef:activity/change/20260820T1416470405690000/104545 context_iri ef:agent/default_context_mapping ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v4 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v5
ef:activity/change/20260820T1416470405690000/218714 unit_iri ef:agent/unit_normalization ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v5 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v6
ef:activity/change/20260820T1416470405690000/224855 prefLabel ef:agent/normalize_name_case ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v6 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v7
ef:activity/change/20260820T1416470405690000/227015 ec_numbers ef:agent/ec_cross_check ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v7 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v8
ef:activity/change/20260820T1416470405690000/242569 properties ef:agent/enrich_references ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v8 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v9
ef:activity/change/20260820T1416470405690000/242570 skos_definition ef:agent/enrich_references ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v9 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v10
ef:activity/change/20260820T1416470405690000/242571 references ef:agent/enrich_references ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v10 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v11
ef:activity/change/20260820T1416470405690000/252760 properties ef:agent/rdkit_pre_consensus ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v11 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v12
ef:activity/change/20260820T1416470405690000/256550 altLabel ef:agent/chebi_altlabels ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v12 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v13
ef:activity/change/20260820T1416470405690000/266974 altLabel ef:agent/consensus_match ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v13 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v14
ef:activity/change/20260820T1416470405690000/266975 cas_match_labels ef:agent/consensus_match ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v14 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v15
ef:activity/change/20260820T1416470405690000/277979 properties ef:agent/opsin_iupac ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v15 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v16
ef:activity/change/20260820T1416470405690000/284698 properties ef:agent/rdkit_post_consensus ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v16 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v17
ef:activity/change/20260820T1416470405690000/290593 altLabel ef:agent/strip_catalogue_altlabels ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v17 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v18
ef:activity/change/20260820T1416470405690000/333289 concept_associations ef:agent/carry_associations_onto_flows ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v18 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v19
ef:activity/change/20260820T1416470405690000/392331 properties ef:agent/normalise_property_values ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v19 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v20
ef:activity/change/20260820T1416470405690000/400739 types ef:agent/link_flows_to_their_substance ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v20 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v21
ef:activity/change/20260820T1416470405690000/400740 roles ef:agent/link_flows_to_their_substance ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v21 ef:flow/5c3743d6-018f-4820-9c0d-3cdbcbf41cc9/v22

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