Omethoate
Everything that changed this flow. Back to the flow
5ce9e31e-415e-4772-8202-b3244cd2dac3
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'BAY 45432' (grade code), 'Bayer 45432' (trade name) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=omethoate||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1113-02-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bc8cef53a7e823bf: {'1113-02-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['1113-02-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38730']; candidate_pubchem_cids=[14210]; selected_pubchem_cids=[14210]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,224 | bootstrap_labels | prefLabel | — | [{"@value":"omethoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Bootstrapped prefLabel from legacy name field |
| 1,225 | bootstrap_labels | name | omethoate | — | Purged legacy name field to enforce prefLabel usage |
| 23,238 | bootstrap_labels | synonyms | ["o,o-dimethyls-methylcarbamoylmethylphosphorothioate","omethoate","omethoate(iso)","2-dimethoxyphosphinoylthio-n-methy… | [] | Removed legacy synonyms field in favor of structured labels |
| 104,978 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","indoor":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 104,979 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 213,749 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,379 | normalize_name_case | prefLabel | [{"@value":"omethoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Omethoate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 228,358 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 228,359 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 228,360 | enrich_references | references | [] | [{"@id":"beilstein:1785256","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['1113-02-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38730']; candidate_pubchem_cids=[14210]; selected_pubchem_cids=[14210]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,661 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | rdkit_pre_consensus from 'CNC(=O)CSP(=O)(OC)OC'; added: monoisotopic_mass |
| 254,534 | chebi_altlabels | altLabel | [] | [{"@value":"2-Dimethoxyphosphinoylthio-N-methylacetamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altla… | Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 270,205 | consensus_match | altLabel | [{"@value":"2-Dimethoxyphosphinoylthio-N-methylacetamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altla… | [{"@value":"2-Dimethoxyphosphinoylthio-N-methylacetamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altla… | group_key=omethoate||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=1113-02-6; added Common Chemistry CAS names as altLabel: BAY 45432, Bayer 45432, Dimethoate <em>O</em>-analog, Dimethoate PO isologue, Dimethoate oxon, Dimethoate oxygen analog, Folimat, Folimat 4E, Le-mat, PO-Dimethoate, Phosphorothioic acid, <em>O</em>,<em>O</em>-dimethyl <em>S</em>-(methylcarbamoylmethyl) ester, Phosphorothioic acid, <em>O</em>,<em>O</em>-dimethyl <em>S</em>-[2-(methylamino)-2-oxoethyl] ester, Phosphorothioic acid, <em>O</em>,<em>O</em>-dimethyl ester, <em>S</em>-ester with 2-mercapto-<em>N</em>-methylacetamide, Spraymate L 1700; object_uuid=fo-bc8cef53a7e823bf |
| 270,206 | consensus_match | cas_match_labels | — | {"1113-02-6":"exactMatch"} | group_key=omethoate||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'1113-02-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-bc8cef53a7e823bf: {'1113-02-6': 'exactMatch'} |
| 273,798 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-Dimethoxyphosphinoylthio-N-methylacetamide' |
| 280,178 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | rdkit_post_consensus from 'CNC(=O)CSP(=O)(OC)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,524 | strip_catalogue_altlabels | altLabel | [{"@value":"2-Dimethoxyphosphinoylthio-N-methylacetamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altla… | [{"@value":"2-Dimethoxyphosphinoylthio-N-methylacetamide","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altla… | Removed 2 catalogue altLabel value(s): 'BAY 45432' (grade code), 'Bayer 45432' (trade name) |
| 333,506 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/5ce9e31e-415e-… | associations resolved on the elementary layer |
| 388,080 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H12NO4PS… | typed the way the ontology types it |
| 394,673 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 394,674 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/1224 | prefLabel | ef:agent/bootstrap_labels | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v0 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v1 |
| ef:activity/change/20260820T0738569779880000/1225 | name | ef:agent/bootstrap_labels | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v1 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v2 |
| ef:activity/change/20260820T0738569779880000/23238 | synonyms | ef:agent/bootstrap_labels | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v2 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v3 |
| ef:activity/change/20260820T0738569779880000/104978 | context | ef:agent/default_context_mapping | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v3 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v4 |
| ef:activity/change/20260820T0738569779880000/104979 | context_iri | ef:agent/default_context_mapping | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v4 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v5 |
| ef:activity/change/20260820T0738569779880000/213749 | unit_iri | ef:agent/unit_normalization | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v5 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v6 |
| ef:activity/change/20260820T0738569779880000/221379 | prefLabel | ef:agent/normalize_name_case | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v6 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v7 |
| ef:activity/change/20260820T0738569779880000/228358 | properties | ef:agent/enrich_references | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v7 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v8 |
| ef:activity/change/20260820T0738569779880000/228359 | skos_definition | ef:agent/enrich_references | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v8 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v9 |
| ef:activity/change/20260820T0738569779880000/228360 | references | ef:agent/enrich_references | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v9 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v10 |
| ef:activity/change/20260820T0738569779880000/248661 | properties | ef:agent/rdkit_pre_consensus | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v10 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v11 |
| ef:activity/change/20260820T0738569779880000/254534 | altLabel | ef:agent/chebi_altlabels | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v11 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v12 |
| ef:activity/change/20260820T0738569779880000/270205 | altLabel | ef:agent/consensus_match | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v12 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v13 |
| ef:activity/change/20260820T0738569779880000/270206 | cas_match_labels | ef:agent/consensus_match | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v13 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v14 |
| ef:activity/change/20260820T0738569779880000/273798 | properties | ef:agent/opsin_iupac | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v14 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v15 |
| ef:activity/change/20260820T0738569779880000/280178 | properties | ef:agent/rdkit_post_consensus | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v15 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v16 |
| ef:activity/change/20260820T0738569779880000/287524 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v16 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v17 |
| ef:activity/change/20260820T0738569779880000/333506 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v17 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v18 |
| ef:activity/change/20260820T0738569779880000/388080 | properties | ef:agent/normalise_property_values | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v18 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v19 |
| ef:activity/change/20260820T0738569779880000/394673 | types | ef:agent/link_flows_to_their_substance | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v19 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v20 |
| ef:activity/change/20260820T0738569779880000/394674 | roles | ef:agent/link_flows_to_their_substance | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v20 | ef:flow/5ce9e31e-415e-4772-8202-b3244cd2dac3/v21 |