β-Carboline
Everything that changed this flow. Back to the flow
617d88bc-e024-4e0b-b436-ccb0382815a0
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 84417' (registry code) |
| prefLabel | 2 | bootstrap_labels, consensus_match | cas=244-63-3; cc_chebi_agreed_name='β-Carboline'; object_uuid=fo-5227dfea0ce231f7 |
| cas_match_labels | 1 | consensus_match | group_key=9h-pyrido[3,4-b]indole||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'244-63-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5227dfea0ce231f7: {'244-63-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['244-63-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_109895']; candidate_pubchem_cids=[1329, 64961, 44483362]; selected_pubchem_cids=[64961]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 10,111 | bootstrap_labels | prefLabel | — | [{"@value":"9h-pyrido[3,4-b]indole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… | Bootstrapped prefLabel from legacy name field |
| 10,112 | bootstrap_labels | name | 9h-pyrido[3,4-b]indole | — | Purged legacy name field to enforce prefLabel usage |
| 10,113 | bootstrap_labels | synonyms | ["organic","9h-pyrido[3,4-b]indole"] | [] | Removed legacy synonyms field in favor of structured labels |
| 107,648 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 107,649 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 216,697 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 236,834 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 236,835 | enrich_references | skos_definition | — | [{"@value":"The parent compound of the β-carbolines, a tricyclic structure comprising an indole ring system ortho- fuse… | Merged ChEBI/PubChem definitions into skos:definition |
| 236,836 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J1.605.351A","provenance":{"prov:wasGeneratedBy":"enrich_refer… | Added references with provenance; cas_numbers=['244-63-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_109895']; candidate_pubchem_cids=[1329, 64961, 44483362]; selected_pubchem_cids=[64961]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,094 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | rdkit_pre_consensus from 'C1=CC=C2C(=C1)C3=C(N2)C=NC=C3'; added: monoisotopic_mass |
| 255,820 | chebi_altlabels | altLabel | [] | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,381 | consensus_match | prefLabel | [{"@value":"9h-pyrido[3,4-b]indole","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttrib… | [{"@value":"β-Carboline","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… | cas=244-63-3; cc_chebi_agreed_name='β-Carboline'; object_uuid=fo-5227dfea0ce231f7 |
| 263,382 | consensus_match | altLabel | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | cas=244-63-3; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-5227dfea0ce231f7 |
| 263,383 | consensus_match | altLabel | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | group_key=9h-pyrido[3,4-b]indole||dimension=Environmental > media=Air > indoor=Unknown; cas=244-63-3; added Common Chemistry CAS names as altLabel: NSC 84417; object_uuid=fo-5227dfea0ce231f7 |
| 263,384 | consensus_match | cas_match_labels | — | {"244-63-3":"exactMatch"} | group_key=9h-pyrido[3,4-b]indole||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'244-63-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-5227dfea0ce231f7: {'244-63-3': 'exactMatch'} |
| 276,276 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'β-Carboline' |
| 282,866 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | rdkit_post_consensus from 'c1ccc2c(c1)[nH]c1cnccc12'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,363 | strip_catalogue_altlabels | altLabel | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"2,9-Diazafluorene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Removed 1 catalogue altLabel value(s): 'NSC 84417' (registry code) |
| 334,820 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/617d88bc-e024-… | associations resolved on the elementary layer |
| 390,622 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C11H8N2"],… | typed the way the ontology types it |
| 398,309 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1122181958110000/10111 | prefLabel | ef:agent/bootstrap_labels | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v0 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v1 |
| ef:activity/change/20260821T1122181958110000/10112 | name | ef:agent/bootstrap_labels | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v1 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v2 |
| ef:activity/change/20260821T1122181958110000/10113 | synonyms | ef:agent/bootstrap_labels | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v2 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v3 |
| ef:activity/change/20260821T1122181958110000/107648 | context | ef:agent/default_context_mapping | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v3 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v4 |
| ef:activity/change/20260821T1122181958110000/107649 | context_iri | ef:agent/default_context_mapping | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v4 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v5 |
| ef:activity/change/20260821T1122181958110000/216697 | unit_iri | ef:agent/unit_normalization | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v5 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v6 |
| ef:activity/change/20260821T1122181958110000/236834 | properties | ef:agent/enrich_references | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v6 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v7 |
| ef:activity/change/20260821T1122181958110000/236835 | skos_definition | ef:agent/enrich_references | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v7 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v8 |
| ef:activity/change/20260821T1122181958110000/236836 | references | ef:agent/enrich_references | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v8 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v9 |
| ef:activity/change/20260821T1122181958110000/251094 | properties | ef:agent/rdkit_pre_consensus | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v9 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v10 |
| ef:activity/change/20260821T1122181958110000/255820 | altLabel | ef:agent/chebi_altlabels | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v10 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v11 |
| ef:activity/change/20260821T1122181958110000/263381 | prefLabel | ef:agent/consensus_match | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v11 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v12 |
| ef:activity/change/20260821T1122181958110000/263382 | altLabel | ef:agent/consensus_match | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v12 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v13 |
| ef:activity/change/20260821T1122181958110000/263383 | altLabel | ef:agent/consensus_match | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v13 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v14 |
| ef:activity/change/20260821T1122181958110000/263384 | cas_match_labels | ef:agent/consensus_match | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v14 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v15 |
| ef:activity/change/20260821T1122181958110000/276276 | properties | ef:agent/opsin_iupac | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v15 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v16 |
| ef:activity/change/20260821T1122181958110000/282866 | properties | ef:agent/rdkit_post_consensus | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v16 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v17 |
| ef:activity/change/20260821T1122181958110000/289363 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v17 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v18 |
| ef:activity/change/20260821T1122181958110000/334820 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v18 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v19 |
| ef:activity/change/20260821T1122181958110000/390622 | properties | ef:agent/normalise_property_values | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v19 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v20 |
| ef:activity/change/20260821T1122181958110000/398309 | types | ef:agent/link_flows_to_their_substance | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v20 | ef:flow/617d88bc-e024-4e0b-b436-ccb0382815a0/v21 |