Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 5 catalogue altLabel value(s): 'LA 111' (grade code), 'NSC 169897' (registry code), 'NSC 77518' (registry code), 'Org 2447' (grade code), 'Wy 3467' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=diazepam||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'439-14-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-54ec5c01935fda41: {'439-14-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['439-14-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_49575']; candidate_pubchem_cids=[3016, 29971406, 69807789]; selected_pubchem_cids=[3016]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
23,069 bootstrap_labels prefLabel [{"@value":"diazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
23,070 bootstrap_labels name diazepam Purged legacy name field to enforce prefLabel usage
23,071 bootstrap_labels synonyms ["organic","diazepam"] [] Removed legacy synonyms field in favor of structured labels
107,650 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
107,651 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
220,617 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,262 normalize_name_case prefLabel [{"@value":"diazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Diazepam","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,804 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,805 enrich_references skos_definition [{"@value":"A 1,4-benzodiazepinone that is 1,3-dihydro-2H-1,4-benzodiazepin-2-one substituted by a chloro group at posi… Merged ChEBI/PubChem definitions into skos:definition
247,806 enrich_references references [] [{"@id":"beilstein:754371","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['439-14-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_49575']; candidate_pubchem_cids=[3016, 29971406, 69807789]; selected_pubchem_cids=[3016]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,266 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… rdkit_pre_consensus from 'CN1C(=O)CN=C(C2=C1C=CC(=C2)Cl)C3=CC=CC=C3'; added: monoisotopic_mass
257,289 chebi_altlabels altLabel [] [{"@value":"7-chloro-1,3-dihydro-1-methyl-5-phenyl-2H-1,4-benzodiazepin-2-one","@language":"en","source":{"prov:wasGene… Added 4 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,691 consensus_match altLabel [{"@value":"7-chloro-1,3-dihydro-1-methyl-5-phenyl-2H-1,4-benzodiazepin-2-one","@language":"en","source":{"prov:wasGene… [{"@value":"7-chloro-1,3-dihydro-1-methyl-5-phenyl-2H-1,4-benzodiazepin-2-one","@language":"en","source":{"prov:wasGene… group_key=diazepam||dimension=Environmental > media=Water > water_body=Unknown; cas=439-14-5; added Common Chemistry CAS names as altLabel: 1-Methyl-5-phenyl-7-chloro-1,3-dihydro-1<em>H</em>-1,4-benzodiazepin-2-one, 1-Methyl-5-phenyl-7-chloro-1,3-dihydro-2<em>H</em>-1,4-benzodiazepin-2-one, 2<em>H</em>-1,4-Benzodiazepin-2-one, 7-chloro-1,3-dihydro-1-methyl-5-phenyl-, 7-Chloro-1-methyl-2-oxo-5-phenyl-3<em>H</em>-1,4-benzodiazepine, 7-Chloro-1-methyl-5-phenyl-1,3-dihydro-1,4-benzodiazepin-2-one, 7-Chloro-1-methyl-5-phenyl-1,3-dihydrobenzo[<em>e</em>][1,4]diazepin-2-one, 7-Chloro-1-methyl-5-phenyl-1<em>H</em>-1,4-benzodiazepin-2(3<em>H</em>)-one, 7-Chloro-1-methyl-5-phenyl-3<em>H</em>-1,4-benzodiazepin-2(1<em>H</em>)-one, 7-Chloro-1-methyl-5-phenyl-3<em>H</em>-1,4-benzodiazepin-2-one, Alboral, Aliseum, Alupram, Amiprol, An-Ding, Anlin, Ansiolin, Ansiolisina, Antenex, Anxionil, Apaurin, Apo-diazepam, Apozepam, Apzepam, Armonil, Arzepam, Assival, Atensine, Atilen, Azedipamin, Baogin, Benzopin, Best, Betapam, Bialzepam, Britazepam, Calmocitene, Calmod, Calmpose, Caudel, Centrazepam, Cercine, Ceregulart, Chuansuan, Compaz, D-Pam, DZP, Desconet, Desloneg, Diacepan, Diaceplex, Dialag, Dialar, Diapam, Diapax, Diapine, Diaquel, Diastat, Diatran, Diazem, Diazemuls, Diazepam-Lipuro, Diazepin, Dipam, Dipaz, Dipezona, Disopam, Dizac, Doval, Drenian, Ducene, Dupin, Duxen, Elcion CR, Eridan, Euphorin, Euphorin P, Eurosan, Evacalm, Faustan, Gewacalm, Gradual, Gubex, Hexalid, Horizon, Horizon (pharmaceutical), Jinpanfan, Kratium, Kratium 2, LA 111, Lamra, Lembrol, Levium, Libervant, Lovium, Mandro, Mandrozep, MeSH ID: D003975, Mentalium, Methyldiazepinone, Methyldiazepinone (pharmaceutical), Meval, Morosan, NSC 169897, NSC 77518, Nellium, Nerozen, Neurolytril, Nivalen, Nixtensyn, Noan, Notense, Novazam, Org 2447, Ortopsique, Paceum, Pacitran, Pamlin, Parzam, Pax, Paxate, Paxel, Paxum, Placidox 10, Placidox 2, Placidox 5, Plidan, Pomin, Propam, Psychopax, Q-Pam, Quievita, Radizepam, Relaminal, Relanium, Relium, Reliver, Ro 5-2807, Saromet, Sedapam, Seduxen, Servizepam, Setonil, Sibazon, Sibazone, Simasedan, Sipam, Solis, Sonacon, Stedon, Stesolid, Stesolin, Tensium, Tranimul, Trankinon, Tranquase, Tranquil, Tranquirit, Tranquo-Puren, Tranquo-Tablinen, Trazepam, Umbrium, Unisedil, Valaxona, Valeo, Valiquid, Valitran, Valium Injectable, Valrelease, Valtoco, Vatran, Vazen, Vival, Vivol, Winii, Wy 3467, Zepaxid; object_uuid=fo-54ec5c01935fda41
265,692 consensus_match cas_match_labels {"439-14-5":"exactMatch"} group_key=diazepam||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'439-14-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-54ec5c01935fda41: {'439-14-5': 'exactMatch'}
279,500 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '7-chloro-1,3-dihydro-1-methyl-5-phenyl-2H-1,4-benzodiazepin-2-one'
286,377 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… rdkit_post_consensus from 'CN1C(=O)CN=C(c2ccccc2)c2cc(Cl)ccc21'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,712 strip_catalogue_altlabels altLabel [{"@value":"7-chloro-1,3-dihydro-1-methyl-5-phenyl-2H-1,4-benzodiazepin-2-one","@language":"en","source":{"prov:wasGene… [{"@value":"7-chloro-1,3-dihydro-1-methyl-5-phenyl-2H-1,4-benzodiazepin-2-one","@language":"en","source":{"prov:wasGene… Removed 5 catalogue altLabel value(s): 'LA 111' (grade code), 'NSC 169897' (registry code), 'NSC 77518' (registry code), 'Org 2447' (grade code), 'Wy 3467' (grade code)
334,823 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/617e4f0c-8e1b-… associations resolved on the elementary layer
393,893 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C16H13ClN2… typed the way the ontology types it
403,123 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
403,124 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/23069 prefLabel ef:agent/bootstrap_labels ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v0 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v1
ef:activity/change/20260822T0600486828500000/23070 name ef:agent/bootstrap_labels ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v1 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v2
ef:activity/change/20260822T0600486828500000/23071 synonyms ef:agent/bootstrap_labels ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v2 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v3
ef:activity/change/20260822T0600486828500000/107650 context ef:agent/default_context_mapping ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v3 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v4
ef:activity/change/20260822T0600486828500000/107651 context_iri ef:agent/default_context_mapping ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v4 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v5
ef:activity/change/20260822T0600486828500000/220617 unit_iri ef:agent/unit_normalization ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v5 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v6
ef:activity/change/20260822T0600486828500000/226262 prefLabel ef:agent/normalize_name_case ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v6 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v7
ef:activity/change/20260822T0600486828500000/247804 properties ef:agent/enrich_references ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v7 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v8
ef:activity/change/20260822T0600486828500000/247805 skos_definition ef:agent/enrich_references ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v8 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v9
ef:activity/change/20260822T0600486828500000/247806 references ef:agent/enrich_references ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v9 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v10
ef:activity/change/20260822T0600486828500000/254266 properties ef:agent/rdkit_pre_consensus ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v10 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v11
ef:activity/change/20260822T0600486828500000/257289 altLabel ef:agent/chebi_altlabels ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v11 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v12
ef:activity/change/20260822T0600486828500000/265691 altLabel ef:agent/consensus_match ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v12 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v13
ef:activity/change/20260822T0600486828500000/265692 cas_match_labels ef:agent/consensus_match ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v13 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v14
ef:activity/change/20260822T0600486828500000/279500 properties ef:agent/opsin_iupac ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v14 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v15
ef:activity/change/20260822T0600486828500000/286377 properties ef:agent/rdkit_post_consensus ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v15 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v16
ef:activity/change/20260822T0600486828500000/291712 altLabel ef:agent/strip_catalogue_altlabels ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v16 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v17
ef:activity/change/20260822T0600486828500000/334823 concept_associations ef:agent/carry_associations_onto_flows ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v17 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v18
ef:activity/change/20260822T0600486828500000/393893 properties ef:agent/normalise_property_values ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v18 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v19
ef:activity/change/20260822T0600486828500000/403123 types ef:agent/link_flows_to_their_substance ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v19 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v20
ef:activity/change/20260822T0600486828500000/403124 roles ef:agent/link_flows_to_their_substance ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v20 ef:flow/617e4f0c-8e1b-41cb-a014-b022957e6950/v21

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