(2r,3r)-2,3-dihydroxybutanedioic Acid
Everything that changed this flow. Back to the flow
61dd3653-c03b-4ca6-9b64-5fd85e6779c9
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'E 334' (grade code), 'NSC 62778' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=(2r,3r)-2,3-dihydroxybutanedioicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'87-69-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8bded85c4161b265: {'87-69-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['87-69-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15671', 'http://purl.obolibrary.org/obo/CHEBI_30924']; candidate_pubchem_cids=[875, 79094, 119400, 271055, 439655, 444305, 447315, 34174841, 156588559]; selected_pubchem_cids=[444305]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 15,798 | bootstrap_labels | prefLabel | — | [{"@value":"(2r,3r)-2,3-dihydroxybutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels",… | Bootstrapped prefLabel from legacy name field |
| 15,799 | bootstrap_labels | name | (2r,3r)-2,3-dihydroxybutanedioic acid | — | Purged legacy name field to enforce prefLabel usage |
| 15,800 | bootstrap_labels | synonyms | ["organic","(+)-tartaricacid","acidetartrique","tartaricacid"] | [] | Removed legacy synonyms field in favor of structured labels |
| 107,892 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 107,893 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified |
| 218,537 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,731 | normalize_name_case | prefLabel | [{"@value":"(2r,3r)-2,3-dihydroxybutanedioic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels",… | [{"@value":"(2r,3r)-2,3-dihydroxybutanedioic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels",… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 242,067 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | Added ChEBI/PubChem properties (chebi_ids=2, pubchem_cids=1) |
| 242,068 | enrich_references | skos_definition | — | [{"@value":"The L-enantiomer of tartaric acid.","@language":"en","provenance":{"prov:wasGeneratedBy":"enrich_references… | Merged ChEBI/PubChem definitions into skos:definition |
| 242,069 | enrich_references | references | [] | [{"@id":"beilstein:1725147","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['87-69-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_15671', 'http://purl.obolibrary.org/obo/CHEBI_30924']; candidate_pubchem_cids=[875, 79094, 119400, 271055, 439655, 444305, 447315, 34174841, 156588559]; selected_pubchem_cids=[444305]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,617 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | rdkit_pre_consensus from 'C(C(C(=O)O)O)(C(=O)O)O'; added: inchi2d_string, monoisotopic_mass |
| 256,481 | chebi_altlabels | altLabel | [] | [{"@value":"(+)-(R,R)-tartaric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… | Added 22 ChEBI synonym(s) as altLabel from 2 linked ChEBI record(s) |
| 257,662 | consensus_match | altLabel | [{"@value":"(+)-(R,R)-tartaric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… | [{"@value":"(+)-(R,R)-tartaric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… | group_key=(2r,3r)-2,3-dihydroxybutanedioicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=87-69-4; added Common Chemistry CAS names as altLabel: (+)-(2<em>R</em>,3<em>R</em>)-Tartaric acid, (2<em>R</em>,3<em>R</em>)-(+)-Tartaric acid, 1,2-Dihydroxyethane-1,2-dicarboxylic acid, 2,3-Dihydroxybutanedioic acid, 2,3-Dihydroxysuccinic acid, <em>d</em>-Tartaric acid, <em>d</em>-α,β-Dihydroxysuccinic acid, <span class="text-smallcaps">L</span>-(+)-Tartaric acid, Butanedioic acid, 2,3-dihydroxy- (2<em>R</em>,3<em>R</em>)-, Butanedioic acid, 2,3-dihydroxy- [<em>R</em>-(<em>R</em>*,<em>R</em>*)]-, Dextrotartaric acid, Dihydroxysuccinic acid, E 334, NSC 62778, Natural tartaric acid, Tartaric acid, Tartaric acid, <span class="text-smallcaps">L</span>-(+)-, Threaric acid; object_uuid=fo-8bded85c4161b265 |
| 257,663 | consensus_match | cas_match_labels | — | {"87-69-4":"exactMatch"} | group_key=(2r,3r)-2,3-dihydroxybutanedioicacid||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory']; cas_sources={'87-69-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-8bded85c4161b265: {'87-69-4': 'exactMatch'} |
| 284,540 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | rdkit_post_consensus from 'C(C(C(=O)O)O)(C(=O)O)O'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,494 | strip_catalogue_altlabels | altLabel | [{"@value":"(+)-(R,R)-tartaric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… | [{"@value":"(+)-(R,R)-tartaric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… | Removed 2 catalogue altLabel value(s): 'E 334' (grade code), 'NSC 62778' (registry code) |
| 334,964 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/61dd3653-c03b-… | associations resolved on the elementary layer |
| 392,193 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | typed the way the ontology types it |
| 400,529 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/MolecularAnion"] | the substance's answer, copied onto its flow |
| 400,530 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H4O6","C… | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/15798 | prefLabel | ef:agent/bootstrap_labels | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v0 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v1 |
| ef:activity/change/20260820T0738569779880000/15799 | name | ef:agent/bootstrap_labels | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v1 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v2 |
| ef:activity/change/20260820T0738569779880000/15800 | synonyms | ef:agent/bootstrap_labels | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v2 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v3 |
| ef:activity/change/20260820T0738569779880000/107892 | context | ef:agent/default_context_mapping | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v3 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v4 |
| ef:activity/change/20260820T0738569779880000/107893 | context_iri | ef:agent/default_context_mapping | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v4 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v5 |
| ef:activity/change/20260820T0738569779880000/218537 | unit_iri | ef:agent/unit_normalization | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v5 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v6 |
| ef:activity/change/20260820T0738569779880000/224731 | prefLabel | ef:agent/normalize_name_case | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v6 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v7 |
| ef:activity/change/20260820T0738569779880000/242067 | properties | ef:agent/enrich_references | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v7 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v8 |
| ef:activity/change/20260820T0738569779880000/242068 | skos_definition | ef:agent/enrich_references | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v8 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v9 |
| ef:activity/change/20260820T0738569779880000/242069 | references | ef:agent/enrich_references | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v9 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v10 |
| ef:activity/change/20260820T0738569779880000/252617 | properties | ef:agent/rdkit_pre_consensus | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v10 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v11 |
| ef:activity/change/20260820T0738569779880000/256481 | altLabel | ef:agent/chebi_altlabels | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v11 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v12 |
| ef:activity/change/20260820T0738569779880000/257662 | altLabel | ef:agent/consensus_match | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v12 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v13 |
| ef:activity/change/20260820T0738569779880000/257663 | cas_match_labels | ef:agent/consensus_match | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v13 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v14 |
| ef:activity/change/20260820T0738569779880000/284540 | properties | ef:agent/rdkit_post_consensus | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v14 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v15 |
| ef:activity/change/20260820T0738569779880000/290494 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v15 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v16 |
| ef:activity/change/20260820T0738569779880000/334964 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v16 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v17 |
| ef:activity/change/20260820T0738569779880000/392193 | properties | ef:agent/normalise_property_values | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v17 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v18 |
| ef:activity/change/20260820T0738569779880000/400529 | types | ef:agent/link_flows_to_their_substance | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v18 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v19 |
| ef:activity/change/20260820T0738569779880000/400530 | properties | ef:agent/link_flows_to_their_substance | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v19 | ef:flow/61dd3653-c03b-4ca6-9b64-5fd85e6779c9/v20 |