Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, consensus_match cas=56073-07-5; cc_chebi_agreed_name='Difenacoum'; object_uuid=fo-a19c44773fe99c3a
cas_match_labels 1 consensus_match group_key=3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56073-07-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a19c44773fe99c3a: {'56073-07-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['56073-07-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_80743']; candidate_pubchem_cids=[54676884]; selected_pubchem_cids=[54676884]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

20
# Step Field From To Why
4,426 bootstrap_labels prefLabel [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… Bootstrapped prefLabel from legacy name field
4,427 bootstrap_labels name 3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin Purged legacy name field to enforce prefLabel usage
4,428 bootstrap_labels synonyms ["2-hydroxy-3-[3-(4-phenylphenyl)-1,2,3,4-tetrahydronaphthalen-1-yl]chromen-4-one","2H-1-Benzopyran-2-one, 3-(3-(1,1'-b… [] Removed legacy synonyms field in favor of structured labels
108,032 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
108,033 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, unspecified
214,817 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
231,436 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
231,437 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
231,438 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J11.112K","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['56073-07-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_80743']; candidate_pubchem_cids=[54676884]; selected_pubchem_cids=[54676884]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,542 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… rdkit_pre_consensus from 'C1C(CC2=CC=CC=C2C1C3=C(C4=CC=CC=C4OC3=O)O)C5=CC=C(C=C5)C6=CC=CC=C6'; added: monoisotopic_mass
261,741 consensus_match prefLabel [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… [{"@value":"Difenacoum","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"cons… cas=56073-07-5; cc_chebi_agreed_name='Difenacoum'; object_uuid=fo-a19c44773fe99c3a
261,742 consensus_match altLabel [] [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… cas=56073-07-5; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-a19c44773fe99c3a
261,743 consensus_match altLabel [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… group_key=3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=56073-07-5; added Common Chemistry CAS names as altLabel: 2<em>H</em>-1-Benzopyran-2-one, 3-(3-[1,1′-biphenyl]-4-yl-1,2,3,4-tetrahydro-1-naphthalenyl)-4-hydroxy-, 3-(3-[1,1′-Biphenyl]-4-yl-1,2,3,4-tetrahydro-1-naphthalenyl)-4-hydroxy-2<em>H</em>-1-benzopyran-2-one, Diphenacoum, Neosorexa, Ratak; object_uuid=fo-a19c44773fe99c3a
261,744 consensus_match cas_match_labels {"56073-07-5":"exactMatch"} group_key=3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'56073-07-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-a19c44773fe99c3a: {'56073-07-5': 'exactMatch'}
274,673 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin'
281,132 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… rdkit_post_consensus from 'O=c1oc2ccccc2c(O)c1C1CC(c2ccc(-c3ccccc3)cc2)Cc2ccccc21'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,205 dedupe_altlabels altLabel [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… [{"@value":"3-(3-biphenyl-4-yl-1,2,3,4-tetrahydro-1-naphthyl)-4-hydroxycoumarin","@language":"en","source":{"prov:wasGe… Deduplicated altLabel values and removed entries matching prefLabel
335,014 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/621b9147-cfbe-… associations resolved on the elementary layer
388,980 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C31H24O3"]… typed the way the ontology types it
395,940 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

20 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260822T0600486828500000/4426 prefLabel ef:agent/bootstrap_labels ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v0 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v1
ef:activity/change/20260822T0600486828500000/4427 name ef:agent/bootstrap_labels ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v1 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v2
ef:activity/change/20260822T0600486828500000/4428 synonyms ef:agent/bootstrap_labels ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v2 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v3
ef:activity/change/20260822T0600486828500000/108032 context ef:agent/default_context_mapping ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v3 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v4
ef:activity/change/20260822T0600486828500000/108033 context_iri ef:agent/default_context_mapping ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v4 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v5
ef:activity/change/20260822T0600486828500000/214817 unit_iri ef:agent/unit_normalization ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v5 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v6
ef:activity/change/20260822T0600486828500000/231436 properties ef:agent/enrich_references ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v6 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v7
ef:activity/change/20260822T0600486828500000/231437 skos_definition ef:agent/enrich_references ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v7 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v8
ef:activity/change/20260822T0600486828500000/231438 references ef:agent/enrich_references ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v8 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v9
ef:activity/change/20260822T0600486828500000/249542 properties ef:agent/rdkit_pre_consensus ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v9 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v10
ef:activity/change/20260822T0600486828500000/261741 prefLabel ef:agent/consensus_match ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v10 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v11
ef:activity/change/20260822T0600486828500000/261742 altLabel ef:agent/consensus_match ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v11 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v12
ef:activity/change/20260822T0600486828500000/261743 altLabel ef:agent/consensus_match ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v12 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v13
ef:activity/change/20260822T0600486828500000/261744 cas_match_labels ef:agent/consensus_match ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v13 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v14
ef:activity/change/20260822T0600486828500000/274673 properties ef:agent/opsin_iupac ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v14 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v15
ef:activity/change/20260822T0600486828500000/281132 properties ef:agent/rdkit_post_consensus ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v15 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v16
ef:activity/change/20260822T0600486828500000/292205 altLabel ef:agent/dedupe_altlabels ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v16 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v17
ef:activity/change/20260822T0600486828500000/335014 concept_associations ef:agent/carry_associations_onto_flows ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v17 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v18
ef:activity/change/20260822T0600486828500000/388980 properties ef:agent/normalise_property_values ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v18 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v19
ef:activity/change/20260822T0600486828500000/395940 types ef:agent/link_flows_to_their_substance ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v19 ef:flow/621b9147-cfbe-40c5-81c4-f12ba48f296c/v20

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