Glycidol
Everything that changed this flow. Back to the flow
622ca2a6-a726-49e1-bfe2-bb8a782073dc
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 46096' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=glycidol||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'556-52-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fddeb190adfd873e: {'556-52-5': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['556-52-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30966']; candidate_pubchem_cids=[11164, 5460455, 87323957, 88288746, 177832579]; selected_pubchem_cids=[11164]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 8,986 | bootstrap_labels | prefLabel | — | [{"@value":"glycidol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Bootstrapped prefLabel from legacy name field |
| 8,987 | bootstrap_labels | name | glycidol | — | Purged legacy name field to enforce prefLabel usage |
| 23,341 | bootstrap_labels | synonyms | ["2,3-epoxypropan-1-ol","glycidol","oxiranemethanol","2-oxiranemethanol","oxiran-2-ylmethanol","2,3epoxypropan1ol(glyci… | [] | Removed legacy synonyms field in favor of structured labels |
| 108,064 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","indoor":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 108,065 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor |
| 216,329 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,218 | normalize_name_case | prefLabel | [{"@value":"glycidol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | [{"@value":"Glycidol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 235,779 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 235,780 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 235,781 | enrich_references | references | [] | [{"@id":"beilstein:383562","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['556-52-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30966']; candidate_pubchem_cids=[11164, 5460455, 87323957, 88288746, 177832579]; selected_pubchem_cids=[11164]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,786 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | rdkit_pre_consensus from 'C1C(O1)CO'; added: monoisotopic_mass |
| 255,677 | chebi_altlabels | altLabel | [] | [{"@value":"(RS)-3-hydroxy-1,2-epoxypropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,443 | consensus_match | altLabel | [{"@value":"(RS)-3-hydroxy-1,2-epoxypropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | [{"@value":"(RS)-3-hydroxy-1,2-epoxypropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | group_key=glycidol||dimension=Environmental > media=Ground > geography=Agricultural; cas=556-52-5; added Common Chemistry CAS names as altLabel: (<em>RS</em>)-Glycidol, (±)-2,3-Epoxy-1-propanol, (±)-Glycidol, 1,2-Epoxy-3-hydroxypropane, 1-Hydroxy-2,3-epoxypropane, 1-Propanol, 2,3-epoxy-, 2-(Hydroxymethyl)oxirane, 2-Oxiranemethanol, <em>dl</em>-Glycidol, Allyl alcohol oxide, Epihydrin alcohol, Epiol OH, Glycide, Glycidyl alcohol, NSC 46096, Oxiranylmethanol, Racemic glycidol; object_uuid=fo-fddeb190adfd873e |
| 267,444 | consensus_match | cas_match_labels | — | {"556-52-5":"exactMatch"} | group_key=glycidol||dimension=Environmental > media=Ground > geography=Agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'556-52-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fddeb190adfd873e: {'556-52-5': 'exactMatch'} |
| 275,968 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(RS)-3-hydroxy-1,2-epoxypropane' |
| 282,537 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | rdkit_post_consensus from 'OCC1CO1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,135 | strip_catalogue_altlabels | altLabel | [{"@value":"(RS)-3-hydroxy-1,2-epoxypropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | [{"@value":"(RS)-3-hydroxy-1,2-epoxypropane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:w… | Removed 1 catalogue altLabel value(s): 'NSC 46096' (registry code) |
| 335,030 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/622ca2a6-a726-… | associations resolved on the elementary layer |
| 390,316 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H6O2"],"… | typed the way the ontology types it |
| 397,878 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/8986 | prefLabel | ef:agent/bootstrap_labels | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v0 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v1 |
| ef:activity/change/20260822T0600486828500000/8987 | name | ef:agent/bootstrap_labels | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v1 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v2 |
| ef:activity/change/20260822T0600486828500000/23341 | synonyms | ef:agent/bootstrap_labels | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v2 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v3 |
| ef:activity/change/20260822T0600486828500000/108064 | context | ef:agent/default_context_mapping | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v3 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v4 |
| ef:activity/change/20260822T0600486828500000/108065 | context_iri | ef:agent/default_context_mapping | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v4 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v5 |
| ef:activity/change/20260822T0600486828500000/216329 | unit_iri | ef:agent/unit_normalization | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v5 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v6 |
| ef:activity/change/20260822T0600486828500000/223218 | prefLabel | ef:agent/normalize_name_case | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v6 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v7 |
| ef:activity/change/20260822T0600486828500000/235779 | properties | ef:agent/enrich_references | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v7 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v8 |
| ef:activity/change/20260822T0600486828500000/235780 | skos_definition | ef:agent/enrich_references | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v8 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v9 |
| ef:activity/change/20260822T0600486828500000/235781 | references | ef:agent/enrich_references | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v9 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v10 |
| ef:activity/change/20260822T0600486828500000/250786 | properties | ef:agent/rdkit_pre_consensus | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v10 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v11 |
| ef:activity/change/20260822T0600486828500000/255677 | altLabel | ef:agent/chebi_altlabels | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v11 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v12 |
| ef:activity/change/20260822T0600486828500000/267443 | altLabel | ef:agent/consensus_match | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v12 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v13 |
| ef:activity/change/20260822T0600486828500000/267444 | cas_match_labels | ef:agent/consensus_match | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v13 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v14 |
| ef:activity/change/20260822T0600486828500000/275968 | properties | ef:agent/opsin_iupac | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v14 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v15 |
| ef:activity/change/20260822T0600486828500000/282537 | properties | ef:agent/rdkit_post_consensus | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v15 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v16 |
| ef:activity/change/20260822T0600486828500000/289135 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v16 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v17 |
| ef:activity/change/20260822T0600486828500000/335030 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v17 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v18 |
| ef:activity/change/20260822T0600486828500000/390316 | properties | ef:agent/normalise_property_values | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v18 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v19 |
| ef:activity/change/20260822T0600486828500000/397878 | types | ef:agent/link_flows_to_their_substance | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v19 | ef:flow/622ca2a6-a726-49e1-bfe2-bb8a782073dc/v20 |