Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'NSC 777' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=121-43-7; cc_chebi_agreed_name='Trimethyl borate'; object_uuid=fo-aad1e91e3fae1477
cas_match_labels 1 consensus_match group_key=methylborate||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'121-43-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-aad1e91e3fae1477: {'121-43-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['121-43-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38913']; candidate_pubchem_cids=[8470, 44726040, 77519508]; selected_pubchem_cids=[8470]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
1,612 bootstrap_labels prefLabel [{"@value":"methyl borate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Bootstrapped prefLabel from legacy name field
1,613 bootstrap_labels name methyl borate Purged legacy name field to enforce prefLabel usage
1,614 bootstrap_labels synonyms ["trimethylborate","methyl borate","trimethyl borate","boric acid (h3bo3), trimethyl ester","methyl borateboric acid, (… [] Removed legacy synonyms field in favor of structured labels
108,324 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Non-agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
108,325 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-noag Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to non-agricultural soil
213,875 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,463 normalize_name_case prefLabel [{"@value":"methyl borate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Methyl Borate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,731 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,732 enrich_references skos_definition [{"@value":"A member of the class of borate esters obtained by the formal condensation of three equivalents of methanol… Merged ChEBI/PubChem definitions into skos:definition
228,733 enrich_references references [] [{"@id":"gmelin:2551","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['121-43-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_38913']; candidate_pubchem_cids=[8470, 44726040, 77519508]; selected_pubchem_cids=[8470]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,763 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… rdkit_pre_consensus from 'B(OC)(OC)OC'; added: monoisotopic_mass
254,565 chebi_altlabels altLabel [] [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,808 consensus_match prefLabel [{"@value":"Methyl Borate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… [{"@value":"Trimethyl borate","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo"… cas=121-43-7; cc_chebi_agreed_name='Trimethyl borate'; object_uuid=fo-aad1e91e3fae1477
268,809 consensus_match altLabel [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… cas=121-43-7; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-aad1e91e3fae1477
268,810 consensus_match altLabel [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=methylborate||dimension=Environmental > media=Ground > geography=Unknown; cas=121-43-7; added Common Chemistry CAS names as altLabel: Borester O, Boric acid (H<sub>3</sub>BO<sub>3</sub>), trimethyl ester, Boric acid trimethyl ester, Boron trimethoxide, Methyl borate ((MeO)<sub>3</sub>B), NSC 777, TMB, TMB-R, Trimethoxyborine, Trimethylborate; object_uuid=fo-aad1e91e3fae1477
268,811 consensus_match cas_match_labels {"121-43-7":"exactMatch"} group_key=methylborate||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'121-43-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-aad1e91e3fae1477: {'121-43-7': 'exactMatch'}
273,884 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Trimethyl borate'
280,274 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… rdkit_post_consensus from 'COB(OC)OC'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,569 strip_catalogue_altlabels altLabel [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"(MeO)3B","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Removed 1 catalogue altLabel value(s): 'NSC 777' (registry code)
335,153 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6290950e-0d51-… associations resolved on the elementary layer
388,167 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C3H9BO3"],… typed the way the ontology types it
394,789 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/1612 prefLabel ef:agent/bootstrap_labels ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v0 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v1
ef:activity/change/20260820T1812399309960000/1613 name ef:agent/bootstrap_labels ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v1 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v2
ef:activity/change/20260820T1812399309960000/1614 synonyms ef:agent/bootstrap_labels ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v2 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v3
ef:activity/change/20260820T1812399309960000/108324 context ef:agent/default_context_mapping ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v3 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v4
ef:activity/change/20260820T1812399309960000/108325 context_iri ef:agent/default_context_mapping ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v4 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v5
ef:activity/change/20260820T1812399309960000/213875 unit_iri ef:agent/unit_normalization ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v5 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v6
ef:activity/change/20260820T1812399309960000/221463 prefLabel ef:agent/normalize_name_case ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v6 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v7
ef:activity/change/20260820T1812399309960000/228731 properties ef:agent/enrich_references ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v7 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v8
ef:activity/change/20260820T1812399309960000/228732 skos_definition ef:agent/enrich_references ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v8 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v9
ef:activity/change/20260820T1812399309960000/228733 references ef:agent/enrich_references ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v9 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v10
ef:activity/change/20260820T1812399309960000/248763 properties ef:agent/rdkit_pre_consensus ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v10 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v11
ef:activity/change/20260820T1812399309960000/254565 altLabel ef:agent/chebi_altlabels ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v11 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v12
ef:activity/change/20260820T1812399309960000/268808 prefLabel ef:agent/consensus_match ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v12 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v13
ef:activity/change/20260820T1812399309960000/268809 altLabel ef:agent/consensus_match ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v13 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v14
ef:activity/change/20260820T1812399309960000/268810 altLabel ef:agent/consensus_match ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v14 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v15
ef:activity/change/20260820T1812399309960000/268811 cas_match_labels ef:agent/consensus_match ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v15 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v16
ef:activity/change/20260820T1812399309960000/273884 properties ef:agent/opsin_iupac ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v16 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v17
ef:activity/change/20260820T1812399309960000/280274 properties ef:agent/rdkit_post_consensus ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v17 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v18
ef:activity/change/20260820T1812399309960000/287569 altLabel ef:agent/strip_catalogue_altlabels ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v18 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v19
ef:activity/change/20260820T1812399309960000/335153 concept_associations ef:agent/carry_associations_onto_flows ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v19 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v20
ef:activity/change/20260820T1812399309960000/388167 properties ef:agent/normalise_property_values ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v20 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v21
ef:activity/change/20260820T1812399309960000/394789 types ef:agent/link_flows_to_their_substance ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v21 ef:flow/6290950e-0d51-4515-b832-ae848bef6181/v22

Keyboard

?
Show or hide this map
Esc
Close

More as the sections are built.