Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 58427' (registry code), 'RTU 1010' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=pentachloronitrobenzene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'82-68-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-09c9a2e978b27301: {'82-68-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['82-68-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34908']; candidate_pubchem_cids=[6720]; selected_pubchem_cids=[6720]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
23,378 bootstrap_labels prefLabel [{"@value":"pentachloronitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Bootstrapped prefLabel from legacy name field
23,379 bootstrap_labels name pentachloronitrobenzene Purged legacy name field to enforce prefLabel usage
23,380 bootstrap_labels synonyms ["pentachloronitrobenzene","quintozene","quintozene(iso)","1,2,3,4,5-pentachloro-6-nitrobenzene","1,2,3,4,5-Pentachloro… [] Removed legacy synonyms field in favor of structured labels
109,078 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
109,079 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
220,665 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
226,314 normalize_name_case prefLabel [{"@value":"pentachloronitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… [{"@value":"Pentachloronitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttri… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
247,890 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
247,891 enrich_references skos_definition [{"@value":"A C-nitro compound that is nitrobenzene in which every hydrogen has been replaced by a chlorine. A fungicid… Merged ChEBI/PubChem definitions into skos:definition
247,892 enrich_references references [] [{"@id":"agr:IND86085618","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['82-68-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34908']; candidate_pubchem_cids=[6720]; selected_pubchem_cids=[6720]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
254,293 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… rdkit_pre_consensus from 'C1(=C(C(=C(C(=C1Cl)Cl)Cl)Cl)Cl)[N+](=O)[O-]'; added: monoisotopic_mass
257,316 chebi_altlabels altLabel [] [{"@value":"1,2,3,4,5-pentachloro-6-nitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… Added 22 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,441 consensus_match altLabel [{"@value":"1,2,3,4,5-pentachloro-6-nitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… [{"@value":"1,2,3,4,5-pentachloro-6-nitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… group_key=pentachloronitrobenzene||dimension=Environmental > media=Air > indoor=Unknown; cas=82-68-8; added Common Chemistry CAS names as altLabel: 1,2,3,4,5-Pentachloronitrobenzene, Avicol (pesticide), Benzene, 1,2,3,4,5-pentachloro-6-nitro-, Benzene, pentachloronitro-, Brassicol 75, Brassicol Super, Chinozan, Fomac 2, GC 3944-3-4, Kobutol, Korsikol, Marisan forte, NSC 58427, Plantacol, Quinosan, Quintozen, RTU 1010, RTU PCNB, Terraclor 30G, Terrazan, Terrazan F, Tritisan; object_uuid=fo-09c9a2e978b27301
270,442 consensus_match cas_match_labels {"82-68-8":"exactMatch"} group_key=pentachloronitrobenzene||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'82-68-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-09c9a2e978b27301: {'82-68-8': 'exactMatch'}
279,547 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Pentachloronitrobenzene'
286,429 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… rdkit_post_consensus from 'O=[N+]([O-])c1c(Cl)c(Cl)c(Cl)c(Cl)c1Cl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,757 strip_catalogue_altlabels altLabel [{"@value":"1,2,3,4,5-pentachloro-6-nitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… [{"@value":"1,2,3,4,5-pentachloro-6-nitrobenzene","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","p… Removed 2 catalogue altLabel value(s): 'NSC 58427' (registry code), 'RTU 1010' (grade code)
335,557 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/63fec9fb-2fd3-… associations resolved on the elementary layer
393,945 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6Cl5NO2"]… typed the way the ontology types it
403,211 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
403,212 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_33286","rdfs:label":"agrochemical","http://www.w3.org/2004/02/skos/core#d… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/23378 prefLabel ef:agent/bootstrap_labels ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v0 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v1
ef:activity/change/20260820T1416470405690000/23379 name ef:agent/bootstrap_labels ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v1 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v2
ef:activity/change/20260820T1416470405690000/23380 synonyms ef:agent/bootstrap_labels ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v2 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v3
ef:activity/change/20260820T1416470405690000/109078 context ef:agent/default_context_mapping ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v3 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v4
ef:activity/change/20260820T1416470405690000/109079 context_iri ef:agent/default_context_mapping ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v4 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v5
ef:activity/change/20260820T1416470405690000/220665 unit_iri ef:agent/unit_normalization ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v5 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v6
ef:activity/change/20260820T1416470405690000/226314 prefLabel ef:agent/normalize_name_case ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v6 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v7
ef:activity/change/20260820T1416470405690000/247890 properties ef:agent/enrich_references ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v7 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v8
ef:activity/change/20260820T1416470405690000/247891 skos_definition ef:agent/enrich_references ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v8 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v9
ef:activity/change/20260820T1416470405690000/247892 references ef:agent/enrich_references ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v9 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v10
ef:activity/change/20260820T1416470405690000/254293 properties ef:agent/rdkit_pre_consensus ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v10 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v11
ef:activity/change/20260820T1416470405690000/257316 altLabel ef:agent/chebi_altlabels ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v11 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v12
ef:activity/change/20260820T1416470405690000/270441 altLabel ef:agent/consensus_match ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v12 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v13
ef:activity/change/20260820T1416470405690000/270442 cas_match_labels ef:agent/consensus_match ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v13 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v14
ef:activity/change/20260820T1416470405690000/279547 properties ef:agent/opsin_iupac ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v14 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v15
ef:activity/change/20260820T1416470405690000/286429 properties ef:agent/rdkit_post_consensus ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v15 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v16
ef:activity/change/20260820T1416470405690000/291757 altLabel ef:agent/strip_catalogue_altlabels ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v16 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v17
ef:activity/change/20260820T1416470405690000/335557 concept_associations ef:agent/carry_associations_onto_flows ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v17 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v18
ef:activity/change/20260820T1416470405690000/393945 properties ef:agent/normalise_property_values ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v18 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v19
ef:activity/change/20260820T1416470405690000/403211 types ef:agent/link_flows_to_their_substance ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v19 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v20
ef:activity/change/20260820T1416470405690000/403212 roles ef:agent/link_flows_to_their_substance ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v20 ef:flow/63fec9fb-2fd3-4bff-a632-7ec35a3ddee5/v21

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