Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 1 catalogue altLabel value(s): 'BM 15075' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=bezafibrate||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'41859-67-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1c8d3c7f78a1b1c9: {'41859-67-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['41859-67-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_47612']; candidate_pubchem_cids=[39042, 45038332]; selected_pubchem_cids=[39042]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
867 bootstrap_labels prefLabel [{"@value":"bezafibrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Bootstrapped prefLabel from legacy name field
868 bootstrap_labels name bezafibrate Purged legacy name field to enforce prefLabel usage
869 bootstrap_labels synonyms ["organic","bezafibrate"] [] Removed legacy synonyms field in favor of structured labels
109,256 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
109,257 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
213,624 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,292 normalize_name_case prefLabel [{"@value":"bezafibrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… [{"@value":"Bezafibrate","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"co… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
228,001 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
228,002 enrich_references skos_definition [{"@value":"A monocarboxylic acid amide obtained by the formal condensation of the carboxy group of 4-chlorobenzoic aci… Merged ChEBI/PubChem definitions into skos:definition
228,003 enrich_references references [] [{"@id":"drugcentral:362","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['41859-67-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_47612']; candidate_pubchem_cids=[39042, 45038332]; selected_pubchem_cids=[39042]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,551 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… rdkit_pre_consensus from 'CC(C)(C(=O)O)OC1=CC=C(C=C1)CCNC(=O)C2=CC=C(C=C2)Cl'; added: monoisotopic_mass
254,490 chebi_altlabels altLabel [] [{"@value":"2-(p-(2-(p-Chlorobenzamido)ethyl)phenoxy)-2-methylpropionic acid","@language":"en","source":{"prov:wasGener… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
264,260 consensus_match altLabel [{"@value":"2-(p-(2-(p-Chlorobenzamido)ethyl)phenoxy)-2-methylpropionic acid","@language":"en","source":{"prov:wasGener… [{"@value":"2-(p-(2-(p-Chlorobenzamido)ethyl)phenoxy)-2-methylpropionic acid","@language":"en","source":{"prov:wasGener… group_key=bezafibrate||dimension=Environmental > media=Air > indoor=Unknown; cas=41859-67-0; added Common Chemistry CAS names as altLabel: 2-[4-[2-[(4-Chlorobenzoyl)amino]ethyl]phenoxy]-2-methylpropanoic acid, BM 15075, Benzofibrate, Bezatol, Difaterol, MeSH ID: D001629, Propanoic acid, 2-[4-[2-[(4-chlorobenzoyl)amino]ethyl]phenoxy]-2-methyl-; object_uuid=fo-1c8d3c7f78a1b1c9
264,261 consensus_match cas_match_labels {"41859-67-0":"exactMatch"} group_key=bezafibrate||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'41859-67-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-1c8d3c7f78a1b1c9: {'41859-67-0': 'exactMatch'}
273,675 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-(p-(2-(p-Chlorobenzamido)ethyl)phenoxy)-2-methylpropionic acid'
280,047 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… rdkit_post_consensus from 'CC(C)(Oc1ccc(CCNC(=O)c2ccc(Cl)cc2)cc1)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,430 strip_catalogue_altlabels altLabel [{"@value":"2-(p-(2-(p-Chlorobenzamido)ethyl)phenoxy)-2-methylpropionic acid","@language":"en","source":{"prov:wasGener… [{"@value":"2-(p-(2-(p-Chlorobenzamido)ethyl)phenoxy)-2-methylpropionic acid","@language":"en","source":{"prov:wasGener… Removed 1 catalogue altLabel value(s): 'BM 15075' (grade code)
335,627 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/643fb69e-15c1-… associations resolved on the elementary layer
387,954 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C19H20ClNO… typed the way the ontology types it
394,510 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
394,511 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_78298","rdfs:label":"environmental contaminant","http://www.w3.org/2004/0… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/867 prefLabel ef:agent/bootstrap_labels ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v0 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v1
ef:activity/change/20260821T1554374006150000/868 name ef:agent/bootstrap_labels ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v1 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v2
ef:activity/change/20260821T1554374006150000/869 synonyms ef:agent/bootstrap_labels ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v2 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v3
ef:activity/change/20260821T1554374006150000/109256 context ef:agent/default_context_mapping ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v3 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v4
ef:activity/change/20260821T1554374006150000/109257 context_iri ef:agent/default_context_mapping ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v4 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v5
ef:activity/change/20260821T1554374006150000/213624 unit_iri ef:agent/unit_normalization ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v5 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v6
ef:activity/change/20260821T1554374006150000/221292 prefLabel ef:agent/normalize_name_case ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v6 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v7
ef:activity/change/20260821T1554374006150000/228001 properties ef:agent/enrich_references ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v7 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v8
ef:activity/change/20260821T1554374006150000/228002 skos_definition ef:agent/enrich_references ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v8 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v9
ef:activity/change/20260821T1554374006150000/228003 references ef:agent/enrich_references ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v9 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v10
ef:activity/change/20260821T1554374006150000/248551 properties ef:agent/rdkit_pre_consensus ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v10 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v11
ef:activity/change/20260821T1554374006150000/254490 altLabel ef:agent/chebi_altlabels ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v11 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v12
ef:activity/change/20260821T1554374006150000/264260 altLabel ef:agent/consensus_match ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v12 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v13
ef:activity/change/20260821T1554374006150000/264261 cas_match_labels ef:agent/consensus_match ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v13 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v14
ef:activity/change/20260821T1554374006150000/273675 properties ef:agent/opsin_iupac ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v14 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v15
ef:activity/change/20260821T1554374006150000/280047 properties ef:agent/rdkit_post_consensus ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v15 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v16
ef:activity/change/20260821T1554374006150000/287430 altLabel ef:agent/strip_catalogue_altlabels ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v16 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v17
ef:activity/change/20260821T1554374006150000/335627 concept_associations ef:agent/carry_associations_onto_flows ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v17 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v18
ef:activity/change/20260821T1554374006150000/387954 properties ef:agent/normalise_property_values ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v18 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v19
ef:activity/change/20260821T1554374006150000/394510 types ef:agent/link_flows_to_their_substance ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v19 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v20
ef:activity/change/20260821T1554374006150000/394511 roles ef:agent/link_flows_to_their_substance ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v20 ef:flow/643fb69e-15c1-45cc-867a-f2e29c93d6c4/v21

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