Ytterbium
Everything that changed this flow. Back to the flow
64b1ce30-6556-11dd-ad8b-0800200c9a66
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 7 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_authoritative, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| prefLabel | 3 | bootstrap_labels, flow_layers.pubchem_element_enrichment, normalize_name_case | element name from the flow object: Ytterbium |
| altLabel | 2 | chebi_altlabels, consensus_match | group_key=ytterbium||dimension=Resource > media=Ground; cas=7440-64-4; added Common Chemistry CAS names as altLabel: MeSH ID: D015018; object_uuid=fo-ee4a2a84192bbf4a |
| cas_match_labels | 1 | consensus_match | group_key=ytterbium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory']; cas_sources={'7440-64-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-ee4a2a84192bbf4a: {'7440-64-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground |
| ec_numbers | 1 | ec_cross_check | Resolved from EC-inventory: 231-173-2 from CAS 7440-64-4 |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7440-64-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33381']; candidate_pubchem_cids=[23992]; selected_pubchem_cids=[23992]; formula_similarity_expected=['Yb']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 23,399 | bootstrap_labels | prefLabel | — | [{"@value":"ytterbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Bootstrapped prefLabel from legacy name field |
| 23,400 | bootstrap_labels | name | ytterbium | — | Purged legacy name field to enforce prefLabel usage |
| 23,401 | bootstrap_labels | synonyms | ["(169yb)ytterbium","(178yb)ytterbium","70Yb","AC1L2N4W","KST-1A1428","KST-1A4101","YB","YB2","yterbio"] | [] | Removed legacy synonyms field in favor of structured labels |
| 109,534 | default_context_mapping | context | — | {"dimension":"Resource","media":"Ground"} | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground |
| 109,535 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/reso-grou | Mapped from context mapping for source=EF 3.1, source context Resources > Resources from ground > Non-renewable element resources from ground |
| 220,669 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,319 | normalize_name_case | prefLabel | [{"@value":"ytterbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Ytterbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 227,092 | ec_cross_check | ec_numbers | [] | ["231-173-2"] | Resolved from EC-inventory: 231-173-2 from CAS 7440-64-4 |
| 247,902 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Yb"],"atte… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 247,903 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 247,904 | enrich_references | references | [] | [{"@id":"gmelin:16320","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"cons… | Added references with provenance; cas_numbers=['7440-64-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_33381']; candidate_pubchem_cids=[23992]; selected_pubchem_cids=[23992]; formula_similarity_expected=['Yb']; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,296 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Yb"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Yb"],"atte… | rdkit_pre_consensus from '[Yb]'; added: monoisotopic_mass |
| 257,318 | chebi_altlabels | altLabel | [] | [{"@value":"70Yb","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | Added 3 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 273,312 | consensus_match | altLabel | [{"@value":"70Yb","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | [{"@value":"70Yb","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consensus-… | group_key=ytterbium||dimension=Resource > media=Ground; cas=7440-64-4; added Common Chemistry CAS names as altLabel: MeSH ID: D015018; object_uuid=fo-ee4a2a84192bbf4a |
| 273,313 | consensus_match | cas_match_labels | — | {"7440-64-4":"exactMatch"} | group_key=ytterbium||dimension=Resource > media=Ground; group_sources=['chebi', 'ec_inventory']; cas_sources={'7440-64-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-ee4a2a84192bbf4a: {'7440-64-4': 'exactMatch'} |
| 279,552 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Yb"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Yb"],"atte… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Ytterbium' |
| 279,788 | rdkit_authoritative | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["Yb"],"atte… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | rdkit_authoritative: set definitive structural data from unique InChI |
| 286,435 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | rdkit_post_consensus from '[Yb]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 335,788 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/64b1ce30-6556-… | associations resolved on the elementary layer |
| 393,951 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | typed the way the ontology types it |
| 403,219 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalElement"] | the substance's answer, copied onto its flow |
| 403,220 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","rdfs:label":"Molecul… | the substance's answer, copied onto its flow |
| 403,863 | flow_layers.pubchem_element_enrichment | prefLabel | [{"@value":"Ytterbium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Ytterbium","@language":"en","@lang":"en","source":{"prov:wasGeneratedBy":"flow_layers.pubchem_element_enric… | element name from the flow object: Ytterbium |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1555490862250000/23399 | prefLabel | ef:agent/bootstrap_labels | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v0 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v1 |
| ef:activity/change/20260820T1555490862250000/23400 | name | ef:agent/bootstrap_labels | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v1 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v2 |
| ef:activity/change/20260820T1555490862250000/23401 | synonyms | ef:agent/bootstrap_labels | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v2 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v3 |
| ef:activity/change/20260820T1555490862250000/109534 | context | ef:agent/default_context_mapping | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v3 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v4 |
| ef:activity/change/20260820T1555490862250000/109535 | context_iri | ef:agent/default_context_mapping | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v4 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v5 |
| ef:activity/change/20260820T1555490862250000/220669 | unit_iri | ef:agent/unit_normalization | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v5 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v6 |
| ef:activity/change/20260820T1555490862250000/226319 | prefLabel | ef:agent/normalize_name_case | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v6 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v7 |
| ef:activity/change/20260820T1555490862250000/227092 | ec_numbers | ef:agent/ec_cross_check | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v7 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v8 |
| ef:activity/change/20260820T1555490862250000/247902 | properties | ef:agent/enrich_references | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v8 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v9 |
| ef:activity/change/20260820T1555490862250000/247903 | skos_definition | ef:agent/enrich_references | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v9 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v10 |
| ef:activity/change/20260820T1555490862250000/247904 | references | ef:agent/enrich_references | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v10 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v11 |
| ef:activity/change/20260820T1555490862250000/254296 | properties | ef:agent/rdkit_pre_consensus | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v11 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v12 |
| ef:activity/change/20260820T1555490862250000/257318 | altLabel | ef:agent/chebi_altlabels | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v12 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v13 |
| ef:activity/change/20260820T1555490862250000/273312 | altLabel | ef:agent/consensus_match | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v13 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v14 |
| ef:activity/change/20260820T1555490862250000/273313 | cas_match_labels | ef:agent/consensus_match | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v14 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v15 |
| ef:activity/change/20260820T1555490862250000/279552 | properties | ef:agent/opsin_iupac | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v15 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v16 |
| ef:activity/change/20260820T1555490862250000/279788 | properties | ef:agent/rdkit_authoritative | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v16 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v17 |
| ef:activity/change/20260820T1555490862250000/286435 | properties | ef:agent/rdkit_post_consensus | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v17 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v18 |
| ef:activity/change/20260820T1555490862250000/335788 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v18 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v19 |
| ef:activity/change/20260820T1555490862250000/393951 | properties | ef:agent/normalise_property_values | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v19 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v20 |
| ef:activity/change/20260820T1555490862250000/403219 | types | ef:agent/link_flows_to_their_substance | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v20 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v21 |
| ef:activity/change/20260820T1555490862250000/403220 | properties | ef:agent/link_flows_to_their_substance | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v21 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v22 |
| ef:activity/change/20260820T1555490862250000/403863 | prefLabel | ef:agent/flow_layers.pubchem_element_enrichment | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v22 | ef:flow/64b1ce30-6556-11dd-ad8b-0800200c9a66/v23 |