Consensus flow list

By field

14 fields
Field Changes Written by Latest note
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
properties 3 normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=malaoxon||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'pubchem']; cas_sources={'1634-78-2': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fb2ef364d22c6d73: {'1634-78-2': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['1634-78-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6649']; candidate_pubchem_cids=[15415, 11726775]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
13,388 bootstrap_labels prefLabel [{"@value":"malaoxon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
13,389 bootstrap_labels name malaoxon Purged legacy name field to enforce prefLabel usage
13,390 bootstrap_labels synonyms ["((dimethoxyphosphinyl)thio)butane dioic acid diethyl ester","((dimethoxyphosphinyl)thio)butanedioic acid diethyl este… [] Removed legacy synonyms field in favor of structured labels
110,970 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
110,971 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
217,768 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,199 normalize_name_case prefLabel [{"@value":"malaoxon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Malaoxon","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
239,872 enrich_references skos_definition [{"@value":"A racemate comprising equimolar amounts of (R) and (S)-malaoxon. It is the active insecticide of the proins… Merged ChEBI/PubChem definitions into skos:definition
239,873 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=1634-78-2","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['1634-78-2']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_6649']; candidate_pubchem_cids=[15415, 11726775]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,213 chebi_altlabels altLabel [] [{"@value":"Liromat","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
268,517 consensus_match altLabel [{"@value":"Liromat","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Liromat","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… group_key=malaoxon||dimension=Environmental > media=Air > strata=Long-term; cas=1634-78-2; added Common Chemistry CAS names as altLabel: <em>O</em>,<em>O</em>-Dimethyl <em>S</em>-1,2-bis(ethoxycarbonyl)ethyl phosphorothioate, <span class="text-smallcaps">DL</span>-Malaoxon, Butanedioic acid, 2-[(dimethoxyphosphinyl)thio]-, 1,4-diethyl ester, Butanedioic acid, [(dimethoxyphosphinyl)thio]-, diethyl ester, Diethyl [(dimethoxyphosphino)thio]butanedioate, Diethyl mercaptosuccinate <em>S</em>-ester with <em>O</em>,<em>O</em>-dimethyl phosphorothioate, Malaoxan, Malaoxone, Malathion oxon, Malathion-<em>O</em>-analog, Maloxon, Phosphorothioic acid, <em>O</em>,<em>O</em>-dimethyl ester, <em>S</em>-ester with diethyl mercaptosuccinate, Succinic acid, mercapto-, diethyl ester, <em>S</em>-ester with <em>O</em>,<em>O</em>-dimethyl phosphorothioate, Succinic acid, mercapto-, diethyl ester, dimethyl phosphate; object_uuid=fo-fb2ef364d22c6d73
268,518 consensus_match cas_match_labels {"1634-78-2":"exactMatch"} group_key=malaoxon||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'pubchem']; cas_sources={'1634-78-2': ['chebi', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-fb2ef364d22c6d73: {'1634-78-2': 'exactMatch'}
277,187 opsin_iupac properties {} {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'O,O-Dimethyl S-(1,2-dicarbethoxy)ethyl phosphorothioate'
283,847 rdkit_post_consensus properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… rdkit_post_consensus from 'CCOC(=O)CC(SP(=O)(OC)OC)C(=O)OCC'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string
292,711 dedupe_altlabels altLabel [{"@value":"Liromat","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… [{"@value":"Liromat","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consens… Deduplicated altLabel values and removed entries matching prefLabel
336,506 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/66c2a707-d72e-… associations resolved on the elementary layer
391,536 normalise_property_values properties {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… {"https://w3id.org/chemrof/IUPAC_name":{"@id":"https://w3id.org/chemrof/IUPAC_name","rdfs:label":"IUPAC name","@value":… typed the way the ontology types it
399,602 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,603 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_22153","rdfs:label":"acaricide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1555490862250000/13388 prefLabel ef:agent/bootstrap_labels ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v0 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v1
ef:activity/change/20260820T1555490862250000/13389 name ef:agent/bootstrap_labels ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v1 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v2
ef:activity/change/20260820T1555490862250000/13390 synonyms ef:agent/bootstrap_labels ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v2 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v3
ef:activity/change/20260820T1555490862250000/110970 context ef:agent/default_context_mapping ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v3 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v4
ef:activity/change/20260820T1555490862250000/110971 context_iri ef:agent/default_context_mapping ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v4 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v5
ef:activity/change/20260820T1555490862250000/217768 unit_iri ef:agent/unit_normalization ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v5 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v6
ef:activity/change/20260820T1555490862250000/224199 prefLabel ef:agent/normalize_name_case ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v6 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v7
ef:activity/change/20260820T1555490862250000/239872 skos_definition ef:agent/enrich_references ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v7 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v8
ef:activity/change/20260820T1555490862250000/239873 references ef:agent/enrich_references ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v8 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v9
ef:activity/change/20260820T1555490862250000/256213 altLabel ef:agent/chebi_altlabels ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v9 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v10
ef:activity/change/20260820T1555490862250000/268517 altLabel ef:agent/consensus_match ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v10 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v11
ef:activity/change/20260820T1555490862250000/268518 cas_match_labels ef:agent/consensus_match ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v11 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v12
ef:activity/change/20260820T1555490862250000/277187 properties ef:agent/opsin_iupac ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v12 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v13
ef:activity/change/20260820T1555490862250000/283847 properties ef:agent/rdkit_post_consensus ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v13 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v14
ef:activity/change/20260820T1555490862250000/292711 altLabel ef:agent/dedupe_altlabels ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v14 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v15
ef:activity/change/20260820T1555490862250000/336506 concept_associations ef:agent/carry_associations_onto_flows ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v15 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v16
ef:activity/change/20260820T1555490862250000/391536 properties ef:agent/normalise_property_values ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v16 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v17
ef:activity/change/20260820T1555490862250000/399602 types ef:agent/link_flows_to_their_substance ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v17 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v18
ef:activity/change/20260820T1555490862250000/399603 roles ef:agent/link_flows_to_their_substance ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v18 ef:flow/66c2a707-d72e-478c-8d13-fff37117cdb9/v19

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