Biphenyl-4-ol
Everything that changed this flow. Back to the flow
66cfc4ff-9698-475f-b5d7-4438633a8b30
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'MK 1100' (grade code), 'NSC 1858' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=biphenyl-4-ol||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'92-69-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-405fbe12b9ab194b: {'92-69-3': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['92-69-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34422']; candidate_pubchem_cids=[7103, 14327, 194407, 53435123]; selected_pubchem_cids=[7103]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 11,146 | bootstrap_labels | prefLabel | — | [{"@value":"biphenyl-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Bootstrapped prefLabel from legacy name field |
| 11,147 | bootstrap_labels | name | biphenyl-4-ol | — | Purged legacy name field to enforce prefLabel usage |
| 11,148 | bootstrap_labels | synonyms | ["(1,1'-Biphenyl)-4-ol","(1,1'-Biphenyl)ol","1-Hydroxy-4-phenylbenzene","4-Biphenylol","4-Diphenylol","4-HYDROXY-BIPHEN… | [] | Removed legacy synonyms field in favor of structured labels |
| 110,994 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 110,995 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-agri | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil |
| 217,034 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 223,694 | normalize_name_case | prefLabel | [{"@value":"biphenyl-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | [{"@value":"Biphenyl-4-ol","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 237,785 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 237,786 | enrich_references | skos_definition | — | [{"@value":"A member of the class of hydroxybiphenyls that is biphenyl carrying a hydroxy group at position 4.","@langu… | Merged ChEBI/PubChem definitions into skos:definition |
| 237,787 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.561K","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['92-69-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_34422']; candidate_pubchem_cids=[7103, 14327, 194407, 53435123]; selected_pubchem_cids=[7103]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,364 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | rdkit_pre_consensus from 'C1=CC=C(C=C1)C2=CC=C(C=C2)O'; added: monoisotopic_mass |
| 255,941 | chebi_altlabels | altLabel | [] | [{"@value":"4-Hydroxybiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Added 12 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 264,290 | consensus_match | altLabel | [{"@value":"4-Hydroxybiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"4-Hydroxybiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | group_key=biphenyl-4-ol||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=92-69-3; added Common Chemistry CAS names as altLabel: 4-Hydroxy-1,1′-biphenyl, <em>p</em>-Xenol, DK-CN, Daicarrier DK-CN, MK 1100, NSC 1858, P-PP, Paraxenol, Tetrosin P 300, [1,1′-Biphenyl]-4-ol; object_uuid=fo-405fbe12b9ab194b |
| 264,291 | consensus_match | cas_match_labels | — | {"92-69-3":"exactMatch"} | group_key=biphenyl-4-ol||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'92-69-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-405fbe12b9ab194b: {'92-69-3': 'exactMatch'} |
| 276,544 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Biphenyl-4-ol' |
| 283,159 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | rdkit_post_consensus from 'Oc1ccc(-c2ccccc2)cc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,563 | strip_catalogue_altlabels | altLabel | [{"@value":"4-Hydroxybiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | [{"@value":"4-Hydroxybiphenyl","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo… | Removed 2 catalogue altLabel value(s): 'MK 1100' (grade code), 'NSC 1858' (registry code) |
| 336,496 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/66cfc4ff-9698-… | associations resolved on the elementary layer |
| 390,900 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H10O"],… | typed the way the ontology types it |
| 398,709 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/11146 | prefLabel | ef:agent/bootstrap_labels | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v0 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v1 |
| ef:activity/change/20260821T1554374006150000/11147 | name | ef:agent/bootstrap_labels | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v1 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v2 |
| ef:activity/change/20260821T1554374006150000/11148 | synonyms | ef:agent/bootstrap_labels | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v2 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v3 |
| ef:activity/change/20260821T1554374006150000/110994 | context | ef:agent/default_context_mapping | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v3 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v4 |
| ef:activity/change/20260821T1554374006150000/110995 | context_iri | ef:agent/default_context_mapping | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v4 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v5 |
| ef:activity/change/20260821T1554374006150000/217034 | unit_iri | ef:agent/unit_normalization | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v5 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v6 |
| ef:activity/change/20260821T1554374006150000/223694 | prefLabel | ef:agent/normalize_name_case | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v6 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v7 |
| ef:activity/change/20260821T1554374006150000/237785 | properties | ef:agent/enrich_references | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v7 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v8 |
| ef:activity/change/20260821T1554374006150000/237786 | skos_definition | ef:agent/enrich_references | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v8 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v9 |
| ef:activity/change/20260821T1554374006150000/237787 | references | ef:agent/enrich_references | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v9 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v10 |
| ef:activity/change/20260821T1554374006150000/251364 | properties | ef:agent/rdkit_pre_consensus | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v10 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v11 |
| ef:activity/change/20260821T1554374006150000/255941 | altLabel | ef:agent/chebi_altlabels | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v11 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v12 |
| ef:activity/change/20260821T1554374006150000/264290 | altLabel | ef:agent/consensus_match | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v12 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v13 |
| ef:activity/change/20260821T1554374006150000/264291 | cas_match_labels | ef:agent/consensus_match | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v13 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v14 |
| ef:activity/change/20260821T1554374006150000/276544 | properties | ef:agent/opsin_iupac | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v14 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v15 |
| ef:activity/change/20260821T1554374006150000/283159 | properties | ef:agent/rdkit_post_consensus | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v15 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v16 |
| ef:activity/change/20260821T1554374006150000/289563 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v16 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v17 |
| ef:activity/change/20260821T1554374006150000/336496 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v17 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v18 |
| ef:activity/change/20260821T1554374006150000/390900 | properties | ef:agent/normalise_property_values | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v18 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v19 |
| ef:activity/change/20260821T1554374006150000/398709 | types | ef:agent/link_flows_to_their_substance | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v19 | ef:flow/66cfc4ff-9698-475f-b5d7-4438633a8b30/v20 |