6-Aminopenicillanic acid
Everything that changed this flow. Back to the flow
6c59722d-e16a-4639-9698-c4cbfcebbad7
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, link_flows_to_their_substance, normalise_property_values, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'NSC 50071' (registry code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=551-16-6; cc_chebi_agreed_name='6-Aminopenicillanic acid'; object_uuid=fo-d89808a3b9d71aa0 |
| cas_match_labels | 1 | consensus_match | group_key=6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylicacid||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'551-16-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-d89808a3b9d71aa0: {'551-16-6': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['551-16-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16705']; candidate_pubchem_cids=[162, 11082, 218148, 835597, 6101751, 7057887, 7059390, 10987686, 12228591]; selected_pubchem_cids=[11082]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 6,157 | bootstrap_labels | prefLabel | — | [{"@value":"6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid","@language":"en","source":{… | Bootstrapped prefLabel from legacy name field |
| 6,158 | bootstrap_labels | name | 6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid | — | Purged legacy name field to enforce prefLabel usage |
| 6,159 | bootstrap_labels | synonyms | ["organic","6-aminopenicillanicacid","6-apa"] | [] | Removed legacy synonyms field in favor of structured labels |
| 114,318 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 114,319 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 215,403 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,523 | normalize_name_case | prefLabel | [{"@value":"6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid","@language":"en","source":{… | [{"@value":"6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic Acid","@language":"en","source":{… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 233,110 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 233,111 | enrich_references | skos_definition | — | [{"@value":"A penicillanic acid compound having a (6R)-amino substituent. The active nucleus common to all penicillins,… | Merged ChEBI/PubChem definitions into skos:definition |
| 233,112 | enrich_references | references | [] | [{"@id":"beilstein:959078","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['551-16-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16705']; candidate_pubchem_cids=[162, 11082, 218148, 835597, 6101751, 7057887, 7059390, 10987686, 12228591]; selected_pubchem_cids=[11082]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,033 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | rdkit_pre_consensus from 'CC1(C(N2C(S1)C(C2=O)N)C(=O)O)C'; added: inchi2d_string, monoisotopic_mass |
| 255,155 | chebi_altlabels | altLabel | [] | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | Added 14 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,236 | consensus_match | prefLabel | [{"@value":"6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylic Acid","@language":"en","source":{… | [{"@value":"6-Aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttri… | cas=551-16-6; cc_chebi_agreed_name='6-Aminopenicillanic acid'; object_uuid=fo-d89808a3b9d71aa0 |
| 263,237 | consensus_match | altLabel | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | cas=551-16-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-d89808a3b9d71aa0 |
| 263,238 | consensus_match | altLabel | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | group_key=6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylicacid||dimension=Environmental > media=Air > strata=Unknown; cas=551-16-6; added Common Chemistry CAS names as altLabel: 4-Thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid, 6-amino-3,3-dimethyl-7-oxo-, 4-Thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid, 6-amino-3,3-dimethyl-7-oxo-, (2<em>S</em>,5<em>R</em>,6<em>R</em>)-, 4-Thia-1-azabicyclo[3.2.0]heptane-2-carboxylic acid, 6-amino-3,3-dimethyl-7-oxo-, [2<em>S</em>-(2α,5α,6β)]-, 6β-Aminopenicillanic acid, NSC 50071; object_uuid=fo-d89808a3b9d71aa0 |
| 263,239 | consensus_match | cas_match_labels | — | {"551-16-6":"exactMatch"} | group_key=6-amino-3,3-dimethyl-7-oxo-4-thia-1-azabicyclo[3.2.0]heptane-2-carboxylicacid||dimension=Environmental > media=Air > strata=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'551-16-6': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-d89808a3b9d71aa0: {'551-16-6': 'exactMatch'} |
| 281,677 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | rdkit_post_consensus from 'CC1(C(N2C(S1)C(C2=O)N)C(=O)O)C'; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,527 | strip_catalogue_altlabels | altLabel | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | [{"@value":"(+)-6-aminopenicillanic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasA… | Removed 1 catalogue altLabel value(s): 'NSC 50071' (registry code) |
| 338,178 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6c59722d-e16a-… | associations resolved on the elementary layer |
| 389,485 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | typed the way the ontology types it |
| 396,650 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,651 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H12N2O3S… | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/6157 | prefLabel | ef:agent/bootstrap_labels | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v0 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v1 |
| ef:activity/change/20260820T0738569779880000/6158 | name | ef:agent/bootstrap_labels | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v1 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v2 |
| ef:activity/change/20260820T0738569779880000/6159 | synonyms | ef:agent/bootstrap_labels | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v2 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v3 |
| ef:activity/change/20260820T0738569779880000/114318 | context | ef:agent/default_context_mapping | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v3 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v4 |
| ef:activity/change/20260820T0738569779880000/114319 | context_iri | ef:agent/default_context_mapping | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v4 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v5 |
| ef:activity/change/20260820T0738569779880000/215403 | unit_iri | ef:agent/unit_normalization | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v5 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v6 |
| ef:activity/change/20260820T0738569779880000/222523 | prefLabel | ef:agent/normalize_name_case | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v6 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v7 |
| ef:activity/change/20260820T0738569779880000/233110 | properties | ef:agent/enrich_references | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v7 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v8 |
| ef:activity/change/20260820T0738569779880000/233111 | skos_definition | ef:agent/enrich_references | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v8 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v9 |
| ef:activity/change/20260820T0738569779880000/233112 | references | ef:agent/enrich_references | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v9 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v10 |
| ef:activity/change/20260820T0738569779880000/250033 | properties | ef:agent/rdkit_pre_consensus | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v10 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v11 |
| ef:activity/change/20260820T0738569779880000/255155 | altLabel | ef:agent/chebi_altlabels | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v11 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v12 |
| ef:activity/change/20260820T0738569779880000/263236 | prefLabel | ef:agent/consensus_match | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v12 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v13 |
| ef:activity/change/20260820T0738569779880000/263237 | altLabel | ef:agent/consensus_match | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v13 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v14 |
| ef:activity/change/20260820T0738569779880000/263238 | altLabel | ef:agent/consensus_match | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v14 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v15 |
| ef:activity/change/20260820T0738569779880000/263239 | cas_match_labels | ef:agent/consensus_match | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v15 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v16 |
| ef:activity/change/20260820T0738569779880000/281677 | properties | ef:agent/rdkit_post_consensus | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v16 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v17 |
| ef:activity/change/20260820T0738569779880000/288527 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v17 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v18 |
| ef:activity/change/20260820T0738569779880000/338178 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v18 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v19 |
| ef:activity/change/20260820T0738569779880000/389485 | properties | ef:agent/normalise_property_values | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v19 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v20 |
| ef:activity/change/20260820T0738569779880000/396650 | types | ef:agent/link_flows_to_their_substance | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v20 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v21 |
| ef:activity/change/20260820T0738569779880000/396651 | properties | ef:agent/link_flows_to_their_substance | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v21 | ef:flow/6c59722d-e16a-4639-9698-c4cbfcebbad7/v22 |