Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=seleniumtetrakis(dimethyldithiocarbamate)||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'144-34-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b6186c5ad87e0533: {'144-34-3': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['144-34-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82494']; candidate_pubchem_cids=[8951, 258956]; selected_pubchem_cids=[8951]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
2,755 bootstrap_labels prefLabel [{"@value":"selenium tetrakis(dimethyldithiocarbamate)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_lab… Bootstrapped prefLabel from legacy name field
2,756 bootstrap_labels name selenium tetrakis(dimethyldithiocarbamate) Purged legacy name field to enforce prefLabel usage
2,757 bootstrap_labels synonyms ["organic","seleniumtetrakis(dimethyldithiocarbamate)"] [] Removed legacy synonyms field in favor of structured labels
114,846 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
114,847 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
214,258 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
221,721 normalize_name_case prefLabel [{"@value":"selenium tetrakis(dimethyldithiocarbamate)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_lab… [{"@value":"Selenium Tetrakis(dimethyldithiocarbamate)","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_lab… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
229,828 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
229,829 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
229,830 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J54.315B","provenance":{"prov:wasGeneratedBy":"enrich_referenc… Added references with provenance; cas_numbers=['144-34-3']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_82494']; candidate_pubchem_cids=[8951, 258956]; selected_pubchem_cids=[8951]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,081 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… rdkit_pre_consensus from 'CN(C)C(=S)S[Se](SC(=S)N(C)C)(SC(=S)N(C)C)SC(=S)N(C)C'; added: monoisotopic_mass
254,693 chebi_altlabels altLabel [] [{"@value":"Tetrakis(dimethyldithiocarbamato)-selenium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabe… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
271,594 consensus_match altLabel [{"@value":"Tetrakis(dimethyldithiocarbamato)-selenium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabe… [{"@value":"Tetrakis(dimethyldithiocarbamato)-selenium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabe… group_key=seleniumtetrakis(dimethyldithiocarbamate)||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=144-34-3; added Common Chemistry CAS names as altLabel: Carbamodithioic acid, <em>N</em>,<em>N</em>-dimethyl-, tetraanhydrosulfide with orthothioselenious acid, Carbamodithioic acid, dimethyl-, tetraanhydrosulfide with orthothioselenious acid, Selenium, tetrakis(dimethyldithiocarbamato)-; object_uuid=fo-b6186c5ad87e0533
271,595 consensus_match cas_match_labels {"144-34-3":"exactMatch"} group_key=seleniumtetrakis(dimethyldithiocarbamate)||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'144-34-3': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b6186c5ad87e0533: {'144-34-3': 'exactMatch'}
274,200 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Selenium Tetrakis(dimethyldithiocarbamate)'
280,622 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… rdkit_post_consensus from 'CN(C)C(=S)[S-].CN(C)C(=S)[S-].CN(C)C(=S)[S-].CN(C)C(=S)[S-].[Se+4]'; added: inchi2d_key_string; confirmed: smiles_string, inchi2d_string, molecular_formula, molecular_mass, monoisotopic_mass
286,771 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
292,125 dedupe_altlabels altLabel [{"@value":"Tetrakis(dimethyldithiocarbamato)-selenium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabe… [{"@value":"Tetrakis(dimethyldithiocarbamato)-selenium","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabe… Deduplicated altLabel values and removed entries matching prefLabel
338,422 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6d4092fe-7f56-… associations resolved on the elementary layer
388,492 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C12H24N4S8… typed the way the ontology types it
395,248 link_flows_to_their_substance types ["https://w3id.org/chemrof/ChemicalSalt"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/2755 prefLabel ef:agent/bootstrap_labels ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v0 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v1
ef:activity/change/20260821T1554374006150000/2756 name ef:agent/bootstrap_labels ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v1 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v2
ef:activity/change/20260821T1554374006150000/2757 synonyms ef:agent/bootstrap_labels ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v2 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v3
ef:activity/change/20260821T1554374006150000/114846 context ef:agent/default_context_mapping ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v3 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v4
ef:activity/change/20260821T1554374006150000/114847 context_iri ef:agent/default_context_mapping ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v4 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v5
ef:activity/change/20260821T1554374006150000/214258 unit_iri ef:agent/unit_normalization ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v5 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v6
ef:activity/change/20260821T1554374006150000/221721 prefLabel ef:agent/normalize_name_case ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v6 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v7
ef:activity/change/20260821T1554374006150000/229828 properties ef:agent/enrich_references ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v7 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v8
ef:activity/change/20260821T1554374006150000/229829 skos_definition ef:agent/enrich_references ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v8 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v9
ef:activity/change/20260821T1554374006150000/229830 references ef:agent/enrich_references ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v9 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v10
ef:activity/change/20260821T1554374006150000/249081 properties ef:agent/rdkit_pre_consensus ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v10 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v11
ef:activity/change/20260821T1554374006150000/254693 altLabel ef:agent/chebi_altlabels ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v11 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v12
ef:activity/change/20260821T1554374006150000/271594 altLabel ef:agent/consensus_match ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v12 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v13
ef:activity/change/20260821T1554374006150000/271595 cas_match_labels ef:agent/consensus_match ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v13 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v14
ef:activity/change/20260821T1554374006150000/274200 properties ef:agent/opsin_iupac ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v14 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v15
ef:activity/change/20260821T1554374006150000/280622 properties ef:agent/rdkit_post_consensus ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v15 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v16
ef:activity/change/20260821T1554374006150000/286771 properties ef:agent/withhold_ambiguous_mass ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v16 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v17
ef:activity/change/20260821T1554374006150000/292125 altLabel ef:agent/dedupe_altlabels ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v17 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v18
ef:activity/change/20260821T1554374006150000/338422 concept_associations ef:agent/carry_associations_onto_flows ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v18 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v19
ef:activity/change/20260821T1554374006150000/388492 properties ef:agent/normalise_property_values ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v19 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v20
ef:activity/change/20260821T1554374006150000/395248 types ef:agent/link_flows_to_their_substance ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v20 ef:flow/6d4092fe-7f56-4b8c-aad6-90bce4ba622c/v21

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