Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'B 66256' (grade code), 'NSC 310405' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=urapidil||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'34661-75-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-77d2ed349ace33e0: {'34661-75-1': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['34661-75-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_32278']; candidate_pubchem_cids=[5639, 167980, 20725184, 74991098, 123134393]; selected_pubchem_cids=[5639]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
12,960 bootstrap_labels prefLabel [{"@value":"urapidil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Bootstrapped prefLabel from legacy name field
12,961 bootstrap_labels name urapidil Purged legacy name field to enforce prefLabel usage
12,962 bootstrap_labels synonyms ["organic","urapidil"] [] Removed legacy synonyms field in favor of structured labels
115,454 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
115,455 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
217,625 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,093 normalize_name_case prefLabel [{"@value":"urapidil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… [{"@value":"Urapidil","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"conse… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
239,478 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
239,479 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
239,480 enrich_references references [] [{"@id":"drugcentral:2796","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… Added references with provenance; cas_numbers=['34661-75-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_32278']; candidate_pubchem_cids=[5639, 167980, 20725184, 74991098, 123134393]; selected_pubchem_cids=[5639]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,154 chebi_altlabels altLabel [] [{"@value":"ebrantil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
273,191 consensus_match altLabel [{"@value":"ebrantil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"ebrantil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… group_key=urapidil||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=34661-75-1; added Common Chemistry CAS names as altLabel: 2,4(1<em>H</em>,3<em>H</em>)-Pyrimidinedione, 6-[[3-[4-(2-methoxyphenyl)-1-piperazinyl]propyl]amino]-1,3-dimethyl-, 6-[[3-[4-(2-Methoxyphenyl)-1-piperazinyl]propyl]amino]-1,3-dimethyl-2,4(1<em>H</em>,3<em>H</em>)-pyrimidinedione, B 66256, BKU, NSC 310405; object_uuid=fo-77d2ed349ace33e0
273,192 consensus_match cas_match_labels {"34661-75-1":"exactMatch"} group_key=urapidil||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'34661-75-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-77d2ed349ace33e0: {'34661-75-1': 'exactMatch'}
277,044 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,4(1H,3H)-Pyrimidinedione, 6-[[3-[4-(2-methoxyphenyl)-1-piperazinyl]propyl]amino]-1,3-dimethyl-'
283,696 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… rdkit_post_consensus from 'COc1ccccc1N1CCN(CCCNc2cc(=O)n(C)c(=O)n2C)CC1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,918 strip_catalogue_altlabels altLabel [{"@value":"ebrantil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… [{"@value":"ebrantil","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"consen… Removed 2 catalogue altLabel value(s): 'B 66256' (grade code), 'NSC 310405' (registry code)
338,724 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6e42f403-0884-… associations resolved on the elementary layer
391,394 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C20H29N5O3… typed the way the ontology types it
399,408 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1122181958110000/12960 prefLabel ef:agent/bootstrap_labels ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v0 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v1
ef:activity/change/20260821T1122181958110000/12961 name ef:agent/bootstrap_labels ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v1 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v2
ef:activity/change/20260821T1122181958110000/12962 synonyms ef:agent/bootstrap_labels ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v2 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v3
ef:activity/change/20260821T1122181958110000/115454 context ef:agent/default_context_mapping ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v3 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v4
ef:activity/change/20260821T1122181958110000/115455 context_iri ef:agent/default_context_mapping ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v4 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v5
ef:activity/change/20260821T1122181958110000/217625 unit_iri ef:agent/unit_normalization ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v5 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v6
ef:activity/change/20260821T1122181958110000/224093 prefLabel ef:agent/normalize_name_case ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v6 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v7
ef:activity/change/20260821T1122181958110000/239478 properties ef:agent/enrich_references ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v7 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v8
ef:activity/change/20260821T1122181958110000/239479 skos_definition ef:agent/enrich_references ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v8 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v9
ef:activity/change/20260821T1122181958110000/239480 references ef:agent/enrich_references ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v9 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v10
ef:activity/change/20260821T1122181958110000/256154 altLabel ef:agent/chebi_altlabels ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v10 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v11
ef:activity/change/20260821T1122181958110000/273191 altLabel ef:agent/consensus_match ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v11 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v12
ef:activity/change/20260821T1122181958110000/273192 cas_match_labels ef:agent/consensus_match ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v12 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v13
ef:activity/change/20260821T1122181958110000/277044 properties ef:agent/opsin_iupac ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v13 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v14
ef:activity/change/20260821T1122181958110000/283696 properties ef:agent/rdkit_post_consensus ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v14 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v15
ef:activity/change/20260821T1122181958110000/289918 altLabel ef:agent/strip_catalogue_altlabels ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v15 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v16
ef:activity/change/20260821T1122181958110000/338724 concept_associations ef:agent/carry_associations_onto_flows ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v16 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v17
ef:activity/change/20260821T1122181958110000/391394 properties ef:agent/normalise_property_values ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v17 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v18
ef:activity/change/20260821T1122181958110000/399408 types ef:agent/link_flows_to_their_substance ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v18 ef:flow/6e42f403-0884-450a-978c-94f1a20a109f/v19

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