Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'FEMA 3946' (grade code), 'NSC 524' (registry code)
cas_match_labels 1 consensus_match group_key=2-methylcyclohexanone||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'583-60-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-af913df38a90c732: {'583-60-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['583-60-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_195390']; candidate_pubchem_cids=[11419, 220297, 637553, 7057963, 13265823]; selected_pubchem_cids=[11419]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
3,068 bootstrap_labels prefLabel [{"@value":"2-methylcyclohexanone","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribu… Bootstrapped prefLabel from legacy name field
3,069 bootstrap_labels name 2-methylcyclohexanone Purged legacy name field to enforce prefLabel usage
3,070 bootstrap_labels synonyms [".alpha.-Methylcyclohexanone","2-Methyl-1-cyclohexanone","2-Methyl-cyclohexanon","2-Methyl-cyclohexanon (german, dutch… [] Removed legacy synonyms field in favor of structured labels
115,988 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
115,989 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
214,363 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
230,126 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
230,127 enrich_references skos_definition [{"@value":"A member of the class of cyclohexanones that is cyclohexanone substituted by a methyl group at position 2."… Merged ChEBI/PubChem definitions into skos:definition
230,128 enrich_references references [] [{"@id":"agr:IND44091056","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"c… Added references with provenance; cas_numbers=['583-60-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_195390']; candidate_pubchem_cids=[11419, 220297, 637553, 7057963, 13265823]; selected_pubchem_cids=[11419]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
249,168 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… rdkit_pre_consensus from 'CC1CCCCC1=O'; added: monoisotopic_mass
254,728 chebi_altlabels altLabel [] [{"@value":"2-methyl-1-cyclohexanone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 8 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
261,142 consensus_match altLabel [{"@value":"2-methyl-1-cyclohexanone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"2-methyl-1-cyclohexanone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=2-methylcyclohexanone||dimension=Environmental > media=Water > water_body=Surface water; cas=583-60-8; added Common Chemistry CAS names as altLabel: (±)-2-Methylcyclohexanone, Cyclohexanone, 2-methyl-, NSC 524, α-Methylcyclohexanone; object_uuid=fo-af913df38a90c732
261,143 consensus_match cas_match_labels {"583-60-8":"exactMatch"} group_key=2-methylcyclohexanone||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'583-60-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-af913df38a90c732: {'583-60-8': 'exactMatch'}
274,280 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-methylcyclohexanone'
280,711 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… rdkit_post_consensus from 'CC1CCCCC1=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,857 strip_catalogue_altlabels altLabel [{"@value":"2-methyl-1-cyclohexanone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"2-methyl-1-cyclohexanone","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Removed 2 catalogue altLabel value(s): 'FEMA 3946' (grade code), 'NSC 524' (registry code)
338,991 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6f2599d3-167d-… associations resolved on the elementary layer
388,577 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C7H12O"],"… typed the way the ontology types it
395,376 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1122181958110000/3068 prefLabel ef:agent/bootstrap_labels ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v0 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v1
ef:activity/change/20260821T1122181958110000/3069 name ef:agent/bootstrap_labels ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v1 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v2
ef:activity/change/20260821T1122181958110000/3070 synonyms ef:agent/bootstrap_labels ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v2 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v3
ef:activity/change/20260821T1122181958110000/115988 context ef:agent/default_context_mapping ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v3 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v4
ef:activity/change/20260821T1122181958110000/115989 context_iri ef:agent/default_context_mapping ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v4 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v5
ef:activity/change/20260821T1122181958110000/214363 unit_iri ef:agent/unit_normalization ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v5 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v6
ef:activity/change/20260821T1122181958110000/230126 properties ef:agent/enrich_references ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v6 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v7
ef:activity/change/20260821T1122181958110000/230127 skos_definition ef:agent/enrich_references ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v7 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v8
ef:activity/change/20260821T1122181958110000/230128 references ef:agent/enrich_references ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v8 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v9
ef:activity/change/20260821T1122181958110000/249168 properties ef:agent/rdkit_pre_consensus ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v9 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v10
ef:activity/change/20260821T1122181958110000/254728 altLabel ef:agent/chebi_altlabels ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v10 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v11
ef:activity/change/20260821T1122181958110000/261142 altLabel ef:agent/consensus_match ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v11 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v12
ef:activity/change/20260821T1122181958110000/261143 cas_match_labels ef:agent/consensus_match ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v12 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v13
ef:activity/change/20260821T1122181958110000/274280 properties ef:agent/opsin_iupac ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v13 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v14
ef:activity/change/20260821T1122181958110000/280711 properties ef:agent/rdkit_post_consensus ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v14 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v15
ef:activity/change/20260821T1122181958110000/287857 altLabel ef:agent/strip_catalogue_altlabels ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v15 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v16
ef:activity/change/20260821T1122181958110000/338991 concept_associations ef:agent/carry_associations_onto_flows ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v16 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v17
ef:activity/change/20260821T1122181958110000/388577 properties ef:agent/normalise_property_values ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v17 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v18
ef:activity/change/20260821T1122181958110000/395376 types ef:agent/link_flows_to_their_substance ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v18 ef:flow/6f2599d3-167d-4111-a569-427bbaede8bd/v19

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