Rhodamine 6G
Everything that changed this flow. Back to the flow
6f332e3a-aca3-4a83-8785-99c499fa32cc
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 10 catalogue altLabel value(s): 'Basonyl Red 482' (trade name), 'Basonyl Red 483' (trade name), 'C.I. 45160' (registry code), 'Exciton 590' (trade name), 'Fanal Red 25532' (trade name), 'Flexo Red 482' (trade name), 'NSC 36345' (registry code), 'R 634' (grade code), 'R 6G' (grade code), 'Rh 6G' (grade code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=989-38-8; cc_chebi_agreed_name='Rhodamine 6G'; object_uuid=fo-b41f6b02cd83d5fe |
| cas_match_labels | 1 | consensus_match | group_key=9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthyliumchloride||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory']; cas_sources={'989-38-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-b41f6b02cd83d5fe: {'989-38-8': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['989-38-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_52672']; candidate_pubchem_cids=[13806, 13807, 235227, 23590625, 24186253, 51358423]; selected_pubchem_cids=[13806]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,941 | bootstrap_labels | prefLabel | — | [{"@value":"9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthylium chloride","@language":"en","source"… | Bootstrapped prefLabel from legacy name field |
| 1,942 | bootstrap_labels | name | 9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthylium chloride | — | Purged legacy name field to enforce prefLabel usage |
| 1,943 | bootstrap_labels | synonyms | ["organic"] | [] | Removed legacy synonyms field in favor of structured labels |
| 116,022 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Surface water"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 116,023 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-suwa | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water |
| 213,986 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,542 | normalize_name_case | prefLabel | [{"@value":"9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthylium chloride","@language":"en","source"… | [{"@value":"9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthylium Chloride","@language":"en","source"… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 229,047 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 229,048 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 229,049 | enrich_references | references | [] | [{"@id":"beilstein:3900071","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['989-38-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_52672']; candidate_pubchem_cids=[13806, 13807, 235227, 23590625, 24186253, 51358423]; selected_pubchem_cids=[13806]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,851 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | rdkit_pre_consensus from 'CCNC1=CC2=C(C=C1C)C(=C3C=C(C(=[NH+]CC)C=C3O2)C)C4=CC=CC=C4C(=O)OCC.[Cl-]'; added: monoisotopic_mass |
| 254,604 | chebi_altlabels | altLabel | [] | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 263,367 | consensus_match | prefLabel | [{"@value":"9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthylium Chloride","@language":"en","source"… | [{"@value":"Rhodamine 6G","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"co… | cas=989-38-8; cc_chebi_agreed_name='Rhodamine 6G'; object_uuid=fo-b41f6b02cd83d5fe |
| 263,368 | consensus_match | altLabel | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | cas=989-38-8; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-b41f6b02cd83d5fe |
| 263,369 | consensus_match | altLabel | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | group_key=9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthyliumchloride||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=989-38-8; added Common Chemistry CAS names as altLabel: 6-Carboxyrhodamine, 6GDN, Aizen Rhodamine 6GCP, Basonyl Red 482, Basonyl Red 483, Benzoic acid, <em>o</em>-[6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3<em>H</em>-xanthen-9-yl]-, ethyl ester, monohydrochloride, C.I. 45160, C.I. Basic Red 1, Calcozine Red 6G, Calcozine Rhodamine 6GX, Eljon Pink Toner, Exciton 590, Fanal Pink B, Fanal Pink GFK, Fanal Red 25532, Flexo Red 482, Heliostable Brilliant Pink B extra, Mitsui Rhodamine 6GCP, NSC 36345, Nyco Liquid Red GF, R 634, R 6G, Rh 6G, Rhodamin 6G, Rhodamine 4GD, Rhodamine 4GH, Rhodamine 5GDN, Rhodamine 5GDN Extra, Rhodamine 5GL, Rhodamine 6G Extra, Rhodamine 6G Extra Base, Rhodamine 6G chloride, Rhodamine 6GB, Rhodamine 6GBN, Rhodamine 6GCP, Rhodamine 6GD, Rhodamine 6GDN, Rhodamine 6GDN Extra, Rhodamine 6GEx ethyl ester, Rhodamine 6GH, Rhodamine 6GO, Rhodamine 6GX, Rhodamine 6JH, Rhodamine 6JH-SA, Rhodamine 6JH-SA Extra 1150, Rhodamine 6Zh-DN, Rhodamine F 5G, Rhodamine F 5GL, Rhodamine GDN, Rhodamine GDN Extra, Rhodamine Y 20-7425, Rhodamine Zh, Silosuper Pink B, Vali Fast Red 1308, Xanthylium, 9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethyl-, chloride, Xanthylium, 9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethyl-, chloride (1:1); object_uuid=fo-b41f6b02cd83d5fe |
| 263,370 | consensus_match | cas_match_labels | — | {"989-38-8":"exactMatch"} | group_key=9-[2-(ethoxycarbonyl)phenyl]-3,6-bis(ethylamino)-2,7-dimethylxanthyliumchloride||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory']; cas_sources={'989-38-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-b41f6b02cd83d5fe: {'989-38-8': 'exactMatch'} |
| 273,975 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '9-(2-(ethoxycarbonyl)phenyl)-3,6-bis(ethylamino)-2,7-dimethylxanthylium chloride' |
| 280,376 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | rdkit_post_consensus from 'CCNc1cc2[o+]c3cc(NCC)c(C)cc3c(-c3ccccc3C(=O)OCC)c2cc1C.[Cl-]'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 286,749 | withhold_ambiguous_mass | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it |
| 287,640 | strip_catalogue_altlabels | altLabel | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | [{"@value":"2-(6-(ethylamino)-3-(ethylimino)-2,7-dimethyl-3H-xanthen-9-yl)benzoic acid, ethyl ester, monohydrochloride"… | Removed 10 catalogue altLabel value(s): 'Basonyl Red 482' (trade name), 'Basonyl Red 483' (trade name), 'C.I. 45160' (registry code), 'Exciton 590' (trade name), 'Fanal Red 25532' (trade name), 'Flexo Red 482' (trade name), 'NSC 36345' (registry code), 'R 634' (grade code), 'R 6G' (grade code), 'Rh 6G' (grade code) |
| 339,010 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6f332e3a-aca3-… | associations resolved on the elementary layer |
| 388,265 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C28H31ClN2… | typed the way the ontology types it |
| 394,926 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/ChemicalSalt"] | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/1941 | prefLabel | ef:agent/bootstrap_labels | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v0 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v1 |
| ef:activity/change/20260821T1554374006150000/1942 | name | ef:agent/bootstrap_labels | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v1 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v2 |
| ef:activity/change/20260821T1554374006150000/1943 | synonyms | ef:agent/bootstrap_labels | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v2 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v3 |
| ef:activity/change/20260821T1554374006150000/116022 | context | ef:agent/default_context_mapping | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v3 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v4 |
| ef:activity/change/20260821T1554374006150000/116023 | context_iri | ef:agent/default_context_mapping | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v4 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v5 |
| ef:activity/change/20260821T1554374006150000/213986 | unit_iri | ef:agent/unit_normalization | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v5 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v6 |
| ef:activity/change/20260821T1554374006150000/221542 | prefLabel | ef:agent/normalize_name_case | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v6 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v7 |
| ef:activity/change/20260821T1554374006150000/229047 | properties | ef:agent/enrich_references | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v7 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v8 |
| ef:activity/change/20260821T1554374006150000/229048 | skos_definition | ef:agent/enrich_references | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v8 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v9 |
| ef:activity/change/20260821T1554374006150000/229049 | references | ef:agent/enrich_references | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v9 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v10 |
| ef:activity/change/20260821T1554374006150000/248851 | properties | ef:agent/rdkit_pre_consensus | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v10 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v11 |
| ef:activity/change/20260821T1554374006150000/254604 | altLabel | ef:agent/chebi_altlabels | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v11 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v12 |
| ef:activity/change/20260821T1554374006150000/263367 | prefLabel | ef:agent/consensus_match | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v12 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v13 |
| ef:activity/change/20260821T1554374006150000/263368 | altLabel | ef:agent/consensus_match | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v13 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v14 |
| ef:activity/change/20260821T1554374006150000/263369 | altLabel | ef:agent/consensus_match | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v14 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v15 |
| ef:activity/change/20260821T1554374006150000/263370 | cas_match_labels | ef:agent/consensus_match | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v15 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v16 |
| ef:activity/change/20260821T1554374006150000/273975 | properties | ef:agent/opsin_iupac | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v16 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v17 |
| ef:activity/change/20260821T1554374006150000/280376 | properties | ef:agent/rdkit_post_consensus | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v17 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v18 |
| ef:activity/change/20260821T1554374006150000/286749 | properties | ef:agent/withhold_ambiguous_mass | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v18 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v19 |
| ef:activity/change/20260821T1554374006150000/287640 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v19 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v20 |
| ef:activity/change/20260821T1554374006150000/339010 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v20 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v21 |
| ef:activity/change/20260821T1554374006150000/388265 | properties | ef:agent/normalise_property_values | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v21 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v22 |
| ef:activity/change/20260821T1554374006150000/394926 | types | ef:agent/link_flows_to_their_substance | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v22 | ef:flow/6f332e3a-aca3-4a83-8785-99c499fa32cc/v23 |