Malic Acid
Everything that changed this flow. Back to the flow
6f66322d-273a-45ba-956b-6e3b2d17fb1b
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 2 | consensus_match, strip_catalogue_altlabels | Removed 4 catalogue altLabel value(s): 'DN 1992' (grade code), 'E 296' (grade code), 'FDA 2018' (grade code), 'NSC 25941' (registry code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=malicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['ec_inventory']; cas_sources={'617-48-1': ['ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0998bc5521a7157c: {'617-48-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['617-48-1']; matched_chebi_ids=[]; candidate_pubchem_cids=[525, 20130941, 87065174]; selected_pubchem_cids=[525]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
19| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 1,778 | bootstrap_labels | prefLabel | — | [{"@value":"malic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Bootstrapped prefLabel from legacy name field |
| 1,779 | bootstrap_labels | name | malic acid | — | Purged legacy name field to enforce prefLabel usage |
| 1,780 | bootstrap_labels | synonyms | ["organic","dl-malicacid","dlmalicacid","dlmalicacid-foodgrade","hydroxysuccinicacid","malicacid"] | [] | Removed legacy synonyms field in favor of structured labels |
| 116,150 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 116,151 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 213,937 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 221,512 | normalize_name_case | prefLabel | [{"@value":"malic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | [{"@value":"Malic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"con… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 228,899 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | Added ChEBI/PubChem properties (chebi_ids=0, pubchem_cids=1) |
| 228,900 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 228,901 | enrich_references | references | [] | [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J3.091K","provenance":{"prov:wasGeneratedBy":"enrich_reference… | Added references with provenance; cas_numbers=['617-48-1']; matched_chebi_ids=[]; candidate_pubchem_cids=[525, 20130941, 87065174]; selected_pubchem_cids=[525]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 248,817 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | rdkit_pre_consensus from 'C(C(C(=O)O)O)C(=O)O'; added: molecular_mass, monoisotopic_mass |
| 268,527 | consensus_match | altLabel | [] | [{"@value":"(±)-Malic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"… | group_key=malicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=617-48-1; added Common Chemistry CAS names as altLabel: (±)-Malic acid, 2-Hydroxybutanedioic acid, 2-Hydroxyethane-1,2-dicarboxylic acid, 2-Hydroxysuccinic acid, <em>R</em>,<em>S</em>(±)-Malic acid, <em>dl</em>-Malic acid, Butanedioic acid, 2-hydroxy-, Butanedioic acid, hydroxy-, DN 1992, Deoxytetraric acid, E 296, FDA 2018, Fuso M, Hydroxybutanedioic acid, Hydroxysuccinic acid, MeSH ID: D008293, Monohydroxybutanedioic acid, Musashi-no-Ringosan, NSC 25941, Nanoveson M, Pomalus Acid, Purac MA, Purac Powder MA, Xeros, α-Hydroxysuccinic acid; object_uuid=fo-0998bc5521a7157c |
| 268,528 | consensus_match | cas_match_labels | — | {"617-48-1":"exactMatch"} | group_key=malicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['ec_inventory']; cas_sources={'617-48-1': ['ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-0998bc5521a7157c: {'617-48-1': 'exactMatch'} |
| 273,953 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Malic Acid' |
| 280,349 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | rdkit_post_consensus from 'O=C(O)CC(O)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 287,628 | strip_catalogue_altlabels | altLabel | [{"@value":"(±)-Malic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"… | [{"@value":"(±)-Malic acid","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"… | Removed 4 catalogue altLabel value(s): 'DN 1992' (grade code), 'E 296' (grade code), 'FDA 2018' (grade code), 'NSC 25941' (registry code) |
| 339,094 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6f66322d-273a-… | associations resolved on the elementary layer |
| 388,243 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C4H6O5"],"… | typed the way the ontology types it |
| 394,886 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
19 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T0738569779880000/1778 | prefLabel | ef:agent/bootstrap_labels | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v0 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v1 |
| ef:activity/change/20260820T0738569779880000/1779 | name | ef:agent/bootstrap_labels | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v1 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v2 |
| ef:activity/change/20260820T0738569779880000/1780 | synonyms | ef:agent/bootstrap_labels | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v2 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v3 |
| ef:activity/change/20260820T0738569779880000/116150 | context | ef:agent/default_context_mapping | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v3 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v4 |
| ef:activity/change/20260820T0738569779880000/116151 | context_iri | ef:agent/default_context_mapping | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v4 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v5 |
| ef:activity/change/20260820T0738569779880000/213937 | unit_iri | ef:agent/unit_normalization | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v5 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v6 |
| ef:activity/change/20260820T0738569779880000/221512 | prefLabel | ef:agent/normalize_name_case | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v6 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v7 |
| ef:activity/change/20260820T0738569779880000/228899 | properties | ef:agent/enrich_references | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v7 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v8 |
| ef:activity/change/20260820T0738569779880000/228900 | skos_definition | ef:agent/enrich_references | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v8 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v9 |
| ef:activity/change/20260820T0738569779880000/228901 | references | ef:agent/enrich_references | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v9 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v10 |
| ef:activity/change/20260820T0738569779880000/248817 | properties | ef:agent/rdkit_pre_consensus | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v10 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v11 |
| ef:activity/change/20260820T0738569779880000/268527 | altLabel | ef:agent/consensus_match | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v11 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v12 |
| ef:activity/change/20260820T0738569779880000/268528 | cas_match_labels | ef:agent/consensus_match | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v12 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v13 |
| ef:activity/change/20260820T0738569779880000/273953 | properties | ef:agent/opsin_iupac | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v13 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v14 |
| ef:activity/change/20260820T0738569779880000/280349 | properties | ef:agent/rdkit_post_consensus | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v14 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v15 |
| ef:activity/change/20260820T0738569779880000/287628 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v15 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v16 |
| ef:activity/change/20260820T0738569779880000/339094 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v16 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v17 |
| ef:activity/change/20260820T0738569779880000/388243 | properties | ef:agent/normalise_property_values | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v17 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v18 |
| ef:activity/change/20260820T0738569779880000/394886 | types | ef:agent/link_flows_to_their_substance | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v18 | ef:flow/6f66322d-273a-45ba-956b-6e3b2d17fb1b/v19 |