Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 142' (registry code), 'NSC 42970' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=chloroaceticacid||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'79-11-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6645db090f179355: {'79-11-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['79-11-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27869']; candidate_pubchem_cids=[300, 518964]; selected_pubchem_cids=[300]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
14,987 bootstrap_labels prefLabel [{"@value":"chloroacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Bootstrapped prefLabel from legacy name field
14,988 bootstrap_labels name chloroacetic acid Purged legacy name field to enforce prefLabel usage
14,989 bootstrap_labels synonyms [".alpha.-Chloroacetic acid","2-chloroacetic acid","AB1002140","AC1L18XJ","AC1Q75JS","AC1Q75JT","AKOS000118920","Acetic… [] Removed legacy synonyms field in favor of structured labels
116,182 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
116,183 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified
218,277 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,548 normalize_name_case prefLabel [{"@value":"chloroacetic acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Chloroacetic Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
241,342 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,343 enrich_references skos_definition [{"@value":"A chlorocarboxylic acid that is acetic acid carrying a 2-chloro substituent.","@language":"en","provenance"… Merged ChEBI/PubChem definitions into skos:definition
241,344 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J2.409K","provenance":{"prov:wasGeneratedBy":"enrich_reference… Added references with provenance; cas_numbers=['79-11-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_27869']; candidate_pubchem_cids=[300, 518964]; selected_pubchem_cids=[300]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,399 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… rdkit_pre_consensus from 'C(C(=O)O)Cl'; added: monoisotopic_mass
256,377 chebi_altlabels altLabel [] [{"@value":"2-chloro-acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… Added 13 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
265,059 consensus_match altLabel [{"@value":"2-chloro-acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… [{"@value":"2-chloro-acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… group_key=chloroaceticacid||dimension=Environmental > media=Water > water_body=Long-term; cas=79-11-8; added Common Chemistry CAS names as altLabel: Acetic acid, 2-chloro-, Acetic acid, chloro-, MCA, MCAA, MKhUK, NSC 142, NSC 42970, α-Chloroacetic acid; object_uuid=fo-6645db090f179355
265,060 consensus_match cas_match_labels {"79-11-8":"exactMatch"} group_key=chloroaceticacid||dimension=Environmental > media=Water > water_body=Long-term; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'79-11-8': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-6645db090f179355: {'79-11-8': 'exactMatch'}
277,588 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Chloroacetic Acid'
284,284 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… rdkit_post_consensus from 'O=C(O)CCl'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,310 strip_catalogue_altlabels altLabel [{"@value":"2-chloro-acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… [{"@value":"2-chloro-acetic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttribute… Removed 2 catalogue altLabel value(s): 'NSC 142' (registry code), 'NSC 42970' (registry code)
339,083 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/6f73bdeb-1d38-… associations resolved on the elementary layer
391,939 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C2H3ClO2"]… typed the way the ontology types it
400,195 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
400,196 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1812399309960000/14987 prefLabel ef:agent/bootstrap_labels ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v0 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v1
ef:activity/change/20260820T1812399309960000/14988 name ef:agent/bootstrap_labels ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v1 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v2
ef:activity/change/20260820T1812399309960000/14989 synonyms ef:agent/bootstrap_labels ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v2 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v3
ef:activity/change/20260820T1812399309960000/116182 context ef:agent/default_context_mapping ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v3 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v4
ef:activity/change/20260820T1812399309960000/116183 context_iri ef:agent/default_context_mapping ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v4 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v5
ef:activity/change/20260820T1812399309960000/218277 unit_iri ef:agent/unit_normalization ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v5 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v6
ef:activity/change/20260820T1812399309960000/224548 prefLabel ef:agent/normalize_name_case ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v6 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v7
ef:activity/change/20260820T1812399309960000/241342 properties ef:agent/enrich_references ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v7 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v8
ef:activity/change/20260820T1812399309960000/241343 skos_definition ef:agent/enrich_references ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v8 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v9
ef:activity/change/20260820T1812399309960000/241344 references ef:agent/enrich_references ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v9 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v10
ef:activity/change/20260820T1812399309960000/252399 properties ef:agent/rdkit_pre_consensus ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v10 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v11
ef:activity/change/20260820T1812399309960000/256377 altLabel ef:agent/chebi_altlabels ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v11 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v12
ef:activity/change/20260820T1812399309960000/265059 altLabel ef:agent/consensus_match ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v12 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v13
ef:activity/change/20260820T1812399309960000/265060 cas_match_labels ef:agent/consensus_match ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v13 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v14
ef:activity/change/20260820T1812399309960000/277588 properties ef:agent/opsin_iupac ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v14 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v15
ef:activity/change/20260820T1812399309960000/284284 properties ef:agent/rdkit_post_consensus ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v15 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v16
ef:activity/change/20260820T1812399309960000/290310 altLabel ef:agent/strip_catalogue_altlabels ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v16 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v17
ef:activity/change/20260820T1812399309960000/339083 concept_associations ef:agent/carry_associations_onto_flows ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v17 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v18
ef:activity/change/20260820T1812399309960000/391939 properties ef:agent/normalise_property_values ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v18 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v19
ef:activity/change/20260820T1812399309960000/400195 types ef:agent/link_flows_to_their_substance ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v19 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v20
ef:activity/change/20260820T1812399309960000/400196 roles ef:agent/link_flows_to_their_substance ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v20 ef:flow/6f73bdeb-1d38-4462-af6f-9e6f54cdba3b/v21

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