Tamoxifen
Everything that changed this flow. Back to the flow
703c8c86-3f2e-401b-9275-0e7c3552e92d
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 6 | enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | the substance's answer, copied onto its flow |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 1 catalogue altLabel value(s): 'ICI 47699' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=tamoxifen||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10540-29-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3c7c8da90e5c483e: {'10540-29-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['10540-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_41774']; candidate_pubchem_cids=[5376, 2733525, 2733526, 3032583, 24200424, 57369580, 71311845, 135723500]; selected_pubchem_cids=[2733526]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
21| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 6,085 | bootstrap_labels | prefLabel | — | [{"@value":"tamoxifen","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Bootstrapped prefLabel from legacy name field |
| 6,086 | bootstrap_labels | name | tamoxifen | — | Purged legacy name field to enforce prefLabel usage |
| 23,628 | bootstrap_labels | synonyms | ["tamoxifen","tamoxifen citrate","ethanamine, 2-[4-[(1z)-1,2-diphenyl-1-butenyl]phenoxy]-n,n-dimethyl-","2-{4-[(1z)-1,2… | [] | Removed legacy synonyms field in favor of structured labels |
| 116,604 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Aircraft cruise height"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 116,605 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-aicrhe | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to lower stratosphere and upper troposphere |
| 215,373 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 222,501 | normalize_name_case | prefLabel | [{"@value":"tamoxifen","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | [{"@value":"Tamoxifen","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"cons… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 233,032 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 233,033 | enrich_references | skos_definition | — | [] | Merged ChEBI/PubChem definitions into skos:definition |
| 233,034 | enrich_references | references | [] | [{"@id":"beilstein:2062020","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['10540-29-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_41774']; candidate_pubchem_cids=[5376, 2733525, 2733526, 3032583, 24200424, 57369580, 71311845, 135723500]; selected_pubchem_cids=[2733526]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 250,004 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | rdkit_pre_consensus from 'CC/C(=C(\\C1=CC=CC=C1)/C2=CC=C(C=C2)OCCN(C)C)/C3=CC=CC=C3'; added: monoisotopic_mass |
| 255,141 | chebi_altlabels | altLabel | [] | [{"@value":"(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine","@language":"en","source":{"prov:wasGener… | Added 12 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 272,229 | consensus_match | altLabel | [{"@value":"(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine","@language":"en","source":{"prov:wasGener… | [{"@value":"(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine","@language":"en","source":{"prov:wasGener… | group_key=tamoxifen||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=10540-29-1; added Common Chemistry CAS names as altLabel: (<em>Z</em>)-2-[4-(1,2-Diphenyl-1-butenyl)phenoxy]-<em>N</em>,<em>N</em>-dimethylethanamine, 2-[4-[(1<em>Z</em>)-1,2-Diphenyl-1-buten-1-yl]phenoxy]-<em>N</em>,<em>N</em>-dimethylethanamine, <em>Z</em>-Tamoxifen, Ethanamine, 2-[4-(1,2-diphenyl-1-butenyl)phenoxy]-<em>N</em>,<em>N</em>-dimethyl-, (<em>Z</em>)-, Ethanamine, 2-[4-[(1<em>Z</em>)-1,2-diphenyl-1-buten-1-yl]phenoxy]-<em>N</em>,<em>N</em>-dimethyl-, Ethanamine, 2-[4-[(1<em>Z</em>)-1,2-diphenyl-1-butenyl]phenoxy]-<em>N</em>,<em>N</em>-dimethyl-, Ethylamine, 2-[<em>p</em>-(1,2-diphenyl-1-butenyl)phenoxy]-<em>N</em>,<em>N</em>-dimethyl-, (<em>Z</em>)-, ICI 47699, Mammaton, MeSH ID: D013629, Novaldex; object_uuid=fo-3c7c8da90e5c483e |
| 272,230 | consensus_match | cas_match_labels | — | {"10540-29-1":"exactMatch"} | group_key=tamoxifen||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'10540-29-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-3c7c8da90e5c483e: {'10540-29-1': 'exactMatch'} |
| 275,139 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine' |
| 281,636 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | rdkit_post_consensus from 'CC/C(=C(\\c1ccccc1)c1ccc(OCCN(C)C)cc1)c1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 288,491 | strip_catalogue_altlabels | altLabel | [{"@value":"(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine","@language":"en","source":{"prov:wasGener… | [{"@value":"(Z)-2-(4-(1,2-Diphenyl-1-butenyl)phenoxy)-N,N-dimethylethanamine","@language":"en","source":{"prov:wasGener… | Removed 1 catalogue altLabel value(s): 'ICI 47699' (grade code) |
| 339,301 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/703c8c86-3f2e-… | associations resolved on the elementary layer |
| 389,445 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | typed the way the ontology types it |
| 396,601 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 396,602 | link_flows_to_their_substance | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C26H29NO"]… | the substance's answer, copied onto its flow |
PROV-O trail
21 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260821T1554374006150000/6085 | prefLabel | ef:agent/bootstrap_labels | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v0 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v1 |
| ef:activity/change/20260821T1554374006150000/6086 | name | ef:agent/bootstrap_labels | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v1 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v2 |
| ef:activity/change/20260821T1554374006150000/23628 | synonyms | ef:agent/bootstrap_labels | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v2 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v3 |
| ef:activity/change/20260821T1554374006150000/116604 | context | ef:agent/default_context_mapping | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v3 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v4 |
| ef:activity/change/20260821T1554374006150000/116605 | context_iri | ef:agent/default_context_mapping | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v4 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v5 |
| ef:activity/change/20260821T1554374006150000/215373 | unit_iri | ef:agent/unit_normalization | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v5 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v6 |
| ef:activity/change/20260821T1554374006150000/222501 | prefLabel | ef:agent/normalize_name_case | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v6 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v7 |
| ef:activity/change/20260821T1554374006150000/233032 | properties | ef:agent/enrich_references | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v7 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v8 |
| ef:activity/change/20260821T1554374006150000/233033 | skos_definition | ef:agent/enrich_references | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v8 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v9 |
| ef:activity/change/20260821T1554374006150000/233034 | references | ef:agent/enrich_references | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v9 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v10 |
| ef:activity/change/20260821T1554374006150000/250004 | properties | ef:agent/rdkit_pre_consensus | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v10 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v11 |
| ef:activity/change/20260821T1554374006150000/255141 | altLabel | ef:agent/chebi_altlabels | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v11 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v12 |
| ef:activity/change/20260821T1554374006150000/272229 | altLabel | ef:agent/consensus_match | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v12 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v13 |
| ef:activity/change/20260821T1554374006150000/272230 | cas_match_labels | ef:agent/consensus_match | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v13 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v14 |
| ef:activity/change/20260821T1554374006150000/275139 | properties | ef:agent/opsin_iupac | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v14 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v15 |
| ef:activity/change/20260821T1554374006150000/281636 | properties | ef:agent/rdkit_post_consensus | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v15 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v16 |
| ef:activity/change/20260821T1554374006150000/288491 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v16 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v17 |
| ef:activity/change/20260821T1554374006150000/339301 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v17 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v18 |
| ef:activity/change/20260821T1554374006150000/389445 | properties | ef:agent/normalise_property_values | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v18 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v19 |
| ef:activity/change/20260821T1554374006150000/396601 | types | ef:agent/link_flows_to_their_substance | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v19 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v20 |
| ef:activity/change/20260821T1554374006150000/396602 | properties | ef:agent/link_flows_to_their_substance | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v20 | ef:flow/703c8c86-3f2e-401b-9275-0e7c3552e92d/v21 |