Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus, withhold_ambiguous_mass typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=barbitalsodium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'144-02-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-23749a0a9fa8f28e: {'144-02-5': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['144-02-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_234044']; candidate_pubchem_cids=[167033, 12598274, 23672000, 23681217, 66629233]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
11,027 bootstrap_labels prefLabel [{"@value":"barbital sodium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Bootstrapped prefLabel from legacy name field
11,028 bootstrap_labels name barbital sodium Purged legacy name field to enforce prefLabel usage
22,214 bootstrap_labels synonyms ["2,4,6(1H,3H,5H)-Pyrimidinetrione, 5,5-diethyl-, monosodium salt","2,4,6(1H,3H,5H)-Pyrimidinetrione, 5,5-diethyl-, mon… [] Removed legacy synonyms field in favor of structured labels
116,782 default_context_mapping context {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
116,783 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground
216,996 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,668 normalize_name_case prefLabel [{"@value":"barbital sodium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… [{"@value":"Barbital Sodium","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
237,677 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2O3.… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0)
237,678 enrich_references skos_definition [] Merged ChEBI/PubChem definitions into skos:definition
237,679 enrich_references references [] [{"@id":"https://commonchemistry.cas.org/detail?cas_rn=144-02-5","provenance":{"prov:wasGeneratedBy":"enrich_references… Added references with provenance; cas_numbers=['144-02-5']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_234044']; candidate_pubchem_cids=[167033, 12598274, 23672000, 23681217, 66629233]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,331 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2O3.… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… rdkit_pre_consensus from 'CCC1(CC)C([O-])=NC(=O)N=C1O.[Na+]'; added: molecular_formula, monoisotopic_mass
255,928 chebi_altlabels altLabel [] [{"@value":"sodium;5,5-diethyl-4,6-dioxo-1H-pyrimidin-2-olate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… Added 1 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,993 consensus_match altLabel [{"@value":"sodium;5,5-diethyl-4,6-dioxo-1H-pyrimidin-2-olate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… [{"@value":"sodium;5,5-diethyl-4,6-dioxo-1H-pyrimidin-2-olate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… group_key=barbitalsodium||dimension=Environmental > media=Air > strata=Aircraft cruise height; cas=144-02-5; added Common Chemistry CAS names as altLabel: 2,4,6(1<em>H</em>,3<em>H</em>,5<em>H</em>)-Pyrimidinetrione, 5,5-diethyl-, monosodium salt, 2,4,6(1<em>H</em>,3<em>H</em>,5<em>H</em>)-Pyrimidinetrione, 5,5-diethyl-, sodium salt (1:1), Barbital soluble, Barbitone sodium, Barbituric acid, 5,5-diethyl-, sodium salt, Diethylmalonylurea sodium, Embinal, Medina, Medinal, Natrinal, Nervoseton, Sodium 5,5-diethylbarbiturate, Sodium Veronal, Sodium barbital, Sodium barbitone, Sodium diethylbarbiturate, Soluble barbital, Soprinal, Thyalone, Veronal sodium; object_uuid=fo-23749a0a9fa8f28e
263,994 consensus_match cas_match_labels {"144-02-5":"exactMatch"} group_key=barbitalsodium||dimension=Environmental > media=Air > strata=Aircraft cruise height; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'144-02-5': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-23749a0a9fa8f28e: {'144-02-5': 'exactMatch'}
276,513 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2,4,6(1H,3H,5H)-Pyrimidinetrione, 5,5-diethyl-, monosodium salt'
283,125 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… rdkit_post_consensus from 'CCC1(CC)C(=O)NC(=O)NC1=O.[Na]'; added: inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass; confirmed: smiles_string, inchi2d_string
286,946 withhold_ambiguous_mass properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… withhold_ambiguous_mass: removed molecular_mass, monoisotopic_mass; the flow carries 2 candidate structures, so no one mass describes it
292,547 dedupe_altlabels altLabel [{"@value":"sodium;5,5-diethyl-4,6-dioxo-1H-pyrimidin-2-olate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… [{"@value":"sodium;5,5-diethyl-4,6-dioxo-1H-pyrimidin-2-olate","@language":"en","source":{"prov:wasGeneratedBy":"chebi_… Deduplicated altLabel values and removed entries matching prefLabel
339,390 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/708a4364-16d9-… associations resolved on the elementary layer
390,870 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H11N2NaO… typed the way the ontology types it
398,666 link_flows_to_their_substance types ["https://w3id.org/chemrof/MolecularComplex"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/11027 prefLabel ef:agent/bootstrap_labels ef:flow/708a4364-16d9-411d-b547-47311ace1378/v0 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v1
ef:activity/change/20260821T1554374006150000/11028 name ef:agent/bootstrap_labels ef:flow/708a4364-16d9-411d-b547-47311ace1378/v1 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v2
ef:activity/change/20260821T1554374006150000/22214 synonyms ef:agent/bootstrap_labels ef:flow/708a4364-16d9-411d-b547-47311ace1378/v2 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v3
ef:activity/change/20260821T1554374006150000/116782 context ef:agent/default_context_mapping ef:flow/708a4364-16d9-411d-b547-47311ace1378/v3 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v4
ef:activity/change/20260821T1554374006150000/116783 context_iri ef:agent/default_context_mapping ef:flow/708a4364-16d9-411d-b547-47311ace1378/v4 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v5
ef:activity/change/20260821T1554374006150000/216996 unit_iri ef:agent/unit_normalization ef:flow/708a4364-16d9-411d-b547-47311ace1378/v5 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v6
ef:activity/change/20260821T1554374006150000/223668 prefLabel ef:agent/normalize_name_case ef:flow/708a4364-16d9-411d-b547-47311ace1378/v6 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v7
ef:activity/change/20260821T1554374006150000/237677 properties ef:agent/enrich_references ef:flow/708a4364-16d9-411d-b547-47311ace1378/v7 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v8
ef:activity/change/20260821T1554374006150000/237678 skos_definition ef:agent/enrich_references ef:flow/708a4364-16d9-411d-b547-47311ace1378/v8 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v9
ef:activity/change/20260821T1554374006150000/237679 references ef:agent/enrich_references ef:flow/708a4364-16d9-411d-b547-47311ace1378/v9 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v10
ef:activity/change/20260821T1554374006150000/251331 properties ef:agent/rdkit_pre_consensus ef:flow/708a4364-16d9-411d-b547-47311ace1378/v10 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v11
ef:activity/change/20260821T1554374006150000/255928 altLabel ef:agent/chebi_altlabels ef:flow/708a4364-16d9-411d-b547-47311ace1378/v11 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v12
ef:activity/change/20260821T1554374006150000/263993 altLabel ef:agent/consensus_match ef:flow/708a4364-16d9-411d-b547-47311ace1378/v12 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v13
ef:activity/change/20260821T1554374006150000/263994 cas_match_labels ef:agent/consensus_match ef:flow/708a4364-16d9-411d-b547-47311ace1378/v13 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v14
ef:activity/change/20260821T1554374006150000/276513 properties ef:agent/opsin_iupac ef:flow/708a4364-16d9-411d-b547-47311ace1378/v14 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v15
ef:activity/change/20260821T1554374006150000/283125 properties ef:agent/rdkit_post_consensus ef:flow/708a4364-16d9-411d-b547-47311ace1378/v15 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v16
ef:activity/change/20260821T1554374006150000/286946 properties ef:agent/withhold_ambiguous_mass ef:flow/708a4364-16d9-411d-b547-47311ace1378/v16 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v17
ef:activity/change/20260821T1554374006150000/292547 altLabel ef:agent/dedupe_altlabels ef:flow/708a4364-16d9-411d-b547-47311ace1378/v17 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v18
ef:activity/change/20260821T1554374006150000/339390 concept_associations ef:agent/carry_associations_onto_flows ef:flow/708a4364-16d9-411d-b547-47311ace1378/v18 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v19
ef:activity/change/20260821T1554374006150000/390870 properties ef:agent/normalise_property_values ef:flow/708a4364-16d9-411d-b547-47311ace1378/v19 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v20
ef:activity/change/20260821T1554374006150000/398666 types ef:agent/link_flows_to_their_substance ef:flow/708a4364-16d9-411d-b547-47311ace1378/v20 ef:flow/708a4364-16d9-411d-b547-47311ace1378/v21

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