Hydroxyurea
Everything that changed this flow. Back to the flow
72fd8c27-2185-49a4-90de-297e8bd4b953
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 3 catalogue altLabel value(s): 'NSC 32065' (registry code), 'SK 22591' (grade code), 'SQ 1089' (grade code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=127-07-1; cc_chebi_agreed_name='Hydroxyurea'; object_uuid=fo-093a852c892b7c7c |
| cas_match_labels | 1 | consensus_match | group_key=hydroxycarbamide||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'127-07-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-093a852c892b7c7c: {'127-07-1': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['127-07-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44423']; candidate_pubchem_cids=[3657, 57416909]; selected_pubchem_cids=[3657]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
22| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 15,802 | bootstrap_labels | prefLabel | — | [{"@value":"hydroxycarbamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Bootstrapped prefLabel from legacy name field |
| 15,803 | bootstrap_labels | name | hydroxycarbamide | — | Purged legacy name field to enforce prefLabel usage |
| 18,108 | bootstrap_labels | synonyms | ["1-HYDROXYUREA","AC1L1GF8","AC1Q4ZXK","BB_SC-7256","Bio1_000451","Bio1_000940","Bio1_001429","Biosupressin","Carbamohy… | [] | Removed legacy synonyms field in favor of structured labels |
| 118,224 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Ground","geography":"Unknown"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 118,225 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-grou-unkn | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to soil, unspecified |
| 218,533 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,727 | normalize_name_case | prefLabel | [{"@value":"hydroxycarbamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | [{"@value":"Hydroxycarbamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 242,064 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 242,065 | enrich_references | skos_definition | — | [{"@value":"A member of the class of ureas that is urea in which one of the hydrogens is replaced by a hydroxy group. A… | Merged ChEBI/PubChem definitions into skos:definition |
| 242,066 | enrich_references | references | [] | [{"@id":"beilstein:1741548","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… | Added references with provenance; cas_numbers=['127-07-1']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_44423']; candidate_pubchem_cids=[3657, 57416909]; selected_pubchem_cids=[3657]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 252,610 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | rdkit_pre_consensus from 'C(=O)(N)NO'; added: monoisotopic_mass |
| 256,472 | chebi_altlabels | altLabel | [] | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Added 15 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 267,894 | consensus_match | prefLabel | [{"@value":"Hydroxycarbamide","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo… | [{"@value":"Hydroxyurea","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"con… | cas=127-07-1; cc_chebi_agreed_name='Hydroxyurea'; object_uuid=fo-093a852c892b7c7c |
| 267,895 | consensus_match | altLabel | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | cas=127-07-1; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-093a852c892b7c7c |
| 267,896 | consensus_match | altLabel | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | group_key=hydroxycarbamide||dimension=Environmental > media=Air > indoor=Unknown; cas=127-07-1; added Common Chemistry CAS names as altLabel: 1-Hydroxyurea, Biosupressin, Cytodrox, Droxia, HU, Hidrix, Hydreia, Hydroxycarbamine, Hydroxylamine, <em>N</em>-(aminocarbonyl)-, Hydroxylurea, Hydura, Hydurea, Litaler, Litalir, MeSH ID: D006918, Mylocel, NCI C04831, NSC 32065, Onco-Carbide, Oxyrea, SK 22591, SQ 1089, Siklos, Urea, <em>N</em>-hydroxy-, Urea, hydroxy-, Xromi; object_uuid=fo-093a852c892b7c7c |
| 267,897 | consensus_match | cas_match_labels | — | {"127-07-1":"exactMatch"} | group_key=hydroxycarbamide||dimension=Environmental > media=Air > indoor=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'127-07-1': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-093a852c892b7c7c: {'127-07-1': 'exactMatch'} |
| 277,815 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Hydroxyurea' |
| 284,519 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | rdkit_post_consensus from 'NC(=O)NO'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 290,473 | strip_catalogue_altlabels | altLabel | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | [{"@value":"Hydroxycarbamid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":… | Removed 3 catalogue altLabel value(s): 'NSC 32065' (registry code), 'SK 22591' (grade code), 'SQ 1089' (grade code) |
| 340,110 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/72fd8c27-2185-… | associations resolved on the elementary layer |
| 392,170 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["CH4N2O2"],… | typed the way the ontology types it |
| 400,506 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
22 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260822T0600486828500000/15802 | prefLabel | ef:agent/bootstrap_labels | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v0 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v1 |
| ef:activity/change/20260822T0600486828500000/15803 | name | ef:agent/bootstrap_labels | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v1 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v2 |
| ef:activity/change/20260822T0600486828500000/18108 | synonyms | ef:agent/bootstrap_labels | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v2 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v3 |
| ef:activity/change/20260822T0600486828500000/118224 | context | ef:agent/default_context_mapping | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v3 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v4 |
| ef:activity/change/20260822T0600486828500000/118225 | context_iri | ef:agent/default_context_mapping | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v4 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v5 |
| ef:activity/change/20260822T0600486828500000/218533 | unit_iri | ef:agent/unit_normalization | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v5 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v6 |
| ef:activity/change/20260822T0600486828500000/224727 | prefLabel | ef:agent/normalize_name_case | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v6 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v7 |
| ef:activity/change/20260822T0600486828500000/242064 | properties | ef:agent/enrich_references | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v7 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v8 |
| ef:activity/change/20260822T0600486828500000/242065 | skos_definition | ef:agent/enrich_references | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v8 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v9 |
| ef:activity/change/20260822T0600486828500000/242066 | references | ef:agent/enrich_references | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v9 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v10 |
| ef:activity/change/20260822T0600486828500000/252610 | properties | ef:agent/rdkit_pre_consensus | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v10 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v11 |
| ef:activity/change/20260822T0600486828500000/256472 | altLabel | ef:agent/chebi_altlabels | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v11 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v12 |
| ef:activity/change/20260822T0600486828500000/267894 | prefLabel | ef:agent/consensus_match | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v12 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v13 |
| ef:activity/change/20260822T0600486828500000/267895 | altLabel | ef:agent/consensus_match | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v13 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v14 |
| ef:activity/change/20260822T0600486828500000/267896 | altLabel | ef:agent/consensus_match | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v14 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v15 |
| ef:activity/change/20260822T0600486828500000/267897 | cas_match_labels | ef:agent/consensus_match | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v15 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v16 |
| ef:activity/change/20260822T0600486828500000/277815 | properties | ef:agent/opsin_iupac | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v16 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v17 |
| ef:activity/change/20260822T0600486828500000/284519 | properties | ef:agent/rdkit_post_consensus | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v17 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v18 |
| ef:activity/change/20260822T0600486828500000/290473 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v18 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v19 |
| ef:activity/change/20260822T0600486828500000/340110 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v19 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v20 |
| ef:activity/change/20260822T0600486828500000/392170 | properties | ef:agent/normalise_property_values | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v20 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v21 |
| ef:activity/change/20260822T0600486828500000/400506 | types | ef:agent/link_flows_to_their_substance | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v21 | ef:flow/72fd8c27-2185-49a4-90de-297e8bd4b953/v22 |