Nerolidol
Everything that changed this flow. Back to the flow
7427bb69-6c82-4cbd-aa24-96e29e718c99
By field
14 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 4 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 2 catalogue altLabel value(s): 'FCI 119b' (grade code), 'FEMA 2772' (grade code) |
| prefLabel | 3 | bootstrap_labels, consensus_match, normalize_name_case | cas=7212-44-4; cc_chebi_agreed_name='Nerolidol'; object_uuid=fo-284f0b08b518bca0 |
| cas_match_labels | 1 | consensus_match | group_key=3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixedisomers||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'7212-44-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-284f0b08b518bca0: {'7212-44-4': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['7212-44-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7524']; candidate_pubchem_cids=[8888, 70702, 242527, 5281525, 5284507, 5320128, 11241545, 21339088]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| roles | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
23| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 13,331 | bootstrap_labels | prefLabel | — | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | Bootstrapped prefLabel from legacy name field |
| 13,332 | bootstrap_labels | name | 3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed isomers | — | Purged legacy name field to enforce prefLabel usage |
| 13,333 | bootstrap_labels | synonyms | ["(6E)-3,7,11-trimethyldodeca-1,6,10-trien-3-ol","(6Z)-3,7,11-trimethyldodeca-1,6,10-trien-3-ol","(E)-3,7,11-Trimethyl-… | [] | Removed legacy synonyms field in favor of structured labels |
| 118,976 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Water","water_body":"Long-term"} | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 118,977 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-wate-lote | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term) |
| 217,745 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 224,185 | normalize_name_case | prefLabel | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed Isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 239,821 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=0, commonchemistry_cas=['7212-44-4']) |
| 239,822 | enrich_references | skos_definition | — | [{"@value":"A farnesane sesquiterpenoid that is dodeca-1,6,10-triene which carries methyl groups at positions 3, 7 and… | Merged ChEBI/PubChem definitions into skos:definition |
| 239,823 | enrich_references | references | [] | [{"@id":"agr:IND607344987","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"… | Added references with provenance; cas_numbers=['7212-44-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_7524']; candidate_pubchem_cids=[8888, 70702, 242527, 5281525, 5284507, 5320128, 11241545, 21339088]; selected_pubchem_cids=[]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 251,953 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | rdkit_pre_consensus from '[H]C(CCC(C)(O)C=C)=C(C)CCC=C(C)C'; added: monoisotopic_mass |
| 256,199 | chebi_altlabels | altLabel | [] | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 261,656 | consensus_match | prefLabel | [{"@value":"3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixed Isomers","@language":"en","source":{"prov:wasGeneratedBy":"b… | [{"@value":"Nerolidol","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"conse… | cas=7212-44-4; cc_chebi_agreed_name='Nerolidol'; object_uuid=fo-284f0b08b518bca0 |
| 261,657 | consensus_match | altLabel | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | cas=7212-44-4; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-284f0b08b518bca0 |
| 261,658 | consensus_match | altLabel | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | group_key=3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixedisomers||dimension=Environmental > media=Water > water_body=Unknown; cas=7212-44-4; added Common Chemistry CAS names as altLabel: (±)-Nerolidol, 1,6,10-Dodecatrien-3-ol, 3,7,11-trimethyl-, FCI 119b, Nerodilol; object_uuid=fo-284f0b08b518bca0 |
| 261,659 | consensus_match | cas_match_labels | — | {"7212-44-4":"exactMatch"} | group_key=3,7,11-trimethyldodeca-1,6,10-trien-3-ol,mixedisomers||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory']; cas_sources={'7212-44-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-284f0b08b518bca0: {'7212-44-4': 'exactMatch'} |
| 277,147 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Nerolidol' |
| 283,804 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | rdkit_post_consensus from 'C=CC(C)(O)CCC=C(C)CCC=C(C)C'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 289,987 | strip_catalogue_altlabels | altLabel | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | [{"@value":"3,7,11-trimethyl-1,6,10-dodecatrien-3-ol","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels… | Removed 2 catalogue altLabel value(s): 'FCI 119b' (grade code), 'FEMA 2772' (grade code) |
| 340,479 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7427bb69-6c82-… | associations resolved on the elementary layer |
| 391,490 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H26O"],… | typed the way the ontology types it |
| 399,545 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
| 399,546 | link_flows_to_their_substance | roles | — | [{"@id":"http://purl.obolibrary.org/obo/CHEBI_24527","rdfs:label":"herbicide","http://www.w3.org/2004/02/skos/core#defi… | the substance's answer, copied onto its flow |
PROV-O trail
23 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20260820T1812399309960000/13331 | prefLabel | ef:agent/bootstrap_labels | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v0 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v1 |
| ef:activity/change/20260820T1812399309960000/13332 | name | ef:agent/bootstrap_labels | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v1 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v2 |
| ef:activity/change/20260820T1812399309960000/13333 | synonyms | ef:agent/bootstrap_labels | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v2 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v3 |
| ef:activity/change/20260820T1812399309960000/118976 | context | ef:agent/default_context_mapping | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v3 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v4 |
| ef:activity/change/20260820T1812399309960000/118977 | context_iri | ef:agent/default_context_mapping | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v4 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v5 |
| ef:activity/change/20260820T1812399309960000/217745 | unit_iri | ef:agent/unit_normalization | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v5 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v6 |
| ef:activity/change/20260820T1812399309960000/224185 | prefLabel | ef:agent/normalize_name_case | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v6 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v7 |
| ef:activity/change/20260820T1812399309960000/239821 | properties | ef:agent/enrich_references | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v7 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v8 |
| ef:activity/change/20260820T1812399309960000/239822 | skos_definition | ef:agent/enrich_references | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v8 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v9 |
| ef:activity/change/20260820T1812399309960000/239823 | references | ef:agent/enrich_references | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v9 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v10 |
| ef:activity/change/20260820T1812399309960000/251953 | properties | ef:agent/rdkit_pre_consensus | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v10 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v11 |
| ef:activity/change/20260820T1812399309960000/256199 | altLabel | ef:agent/chebi_altlabels | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v11 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v12 |
| ef:activity/change/20260820T1812399309960000/261656 | prefLabel | ef:agent/consensus_match | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v12 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v13 |
| ef:activity/change/20260820T1812399309960000/261657 | altLabel | ef:agent/consensus_match | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v13 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v14 |
| ef:activity/change/20260820T1812399309960000/261658 | altLabel | ef:agent/consensus_match | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v14 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v15 |
| ef:activity/change/20260820T1812399309960000/261659 | cas_match_labels | ef:agent/consensus_match | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v15 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v16 |
| ef:activity/change/20260820T1812399309960000/277147 | properties | ef:agent/opsin_iupac | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v16 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v17 |
| ef:activity/change/20260820T1812399309960000/283804 | properties | ef:agent/rdkit_post_consensus | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v17 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v18 |
| ef:activity/change/20260820T1812399309960000/289987 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v18 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v19 |
| ef:activity/change/20260820T1812399309960000/340479 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v19 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v20 |
| ef:activity/change/20260820T1812399309960000/391490 | properties | ef:agent/normalise_property_values | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v20 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v21 |
| ef:activity/change/20260820T1812399309960000/399545 | types | ef:agent/link_flows_to_their_substance | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v21 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v22 |
| ef:activity/change/20260820T1812399309960000/399546 | roles | ef:agent/link_flows_to_their_substance | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v22 | ef:flow/7427bb69-6c82-4cbd-aa24-96e29e718c99/v23 |