Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 8 catalogue altLabel value(s): 'NSC 139614' (registry code), 'NSC 2679' (registry code), 'NSC 2927' (registry code), 'NSC 52336' (registry code), 'NSC 54069' (registry code), 'NSC 5575' (registry code), 'NSC 77075' (registry code), 'NSC 78795' (registry code)
prefLabel 3 bootstrap_labels, consensus_match, normalize_name_case cas=123-54-6; cc_chebi_agreed_name='Acetylacetone'; object_uuid=fo-b0c993dac61c2183
cas_match_labels 1 consensus_match group_key=pentane-2,4-dione||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'123-54-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b0c993dac61c2183: {'123-54-6': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['123-54-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_14750']; candidate_pubchem_cids=[31261, 20494703]; selected_pubchem_cids=[31261]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
10,835 bootstrap_labels prefLabel [{"@value":"pentane-2,4-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Bootstrapped prefLabel from legacy name field
10,836 bootstrap_labels name pentane-2,4-dione Purged legacy name field to enforce prefLabel usage
23,722 bootstrap_labels synonyms ["acetylacetone","pentane-2,4-dione","pentanedione, 2,4-","2,4-pentanedione","2,4-dioxopentane","2-propanone,acetyl","a… [] Removed legacy synonyms field in favor of structured labels
119,146 default_context_mapping context {"dimension":"Environmental","media":"Air","indoor":"Unknown"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
119,147 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-air-indr-unkn Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to air, indoor
216,932 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
223,623 normalize_name_case prefLabel [{"@value":"pentane-2,4-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Pentane-2,4-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
237,493 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
237,494 enrich_references skos_definition [{"@value":"A β-diketone that is pentane in which the hydrogens at positions 2 and 4 are replaced by oxo groups.","@lan… Merged ChEBI/PubChem definitions into skos:definition
237,495 enrich_references references [] [{"@id":"gmelin:2537","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['123-54-6']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_14750']; candidate_pubchem_cids=[31261, 20494703]; selected_pubchem_cids=[31261]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
251,276 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… rdkit_pre_consensus from 'CC(=O)CC(=O)C'; added: monoisotopic_mass
255,907 chebi_altlabels altLabel [] [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Added 12 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
270,466 consensus_match prefLabel [{"@value":"Pentane-2,4-dione","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedT… [{"@value":"Acetylacetone","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":"c… cas=123-54-6; cc_chebi_agreed_name='Acetylacetone'; object_uuid=fo-b0c993dac61c2183
270,467 consensus_match altLabel [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… cas=123-54-6; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-b0c993dac61c2183
270,468 consensus_match altLabel [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… group_key=pentane-2,4-dione||dimension=Environmental > media=Water > water_body=Ocean; cas=123-54-6; added Common Chemistry CAS names as altLabel: 2,4-Pentandione, 2-Propanone, acetyl-, Diacetylmethane, NSC 139614, NSC 2679, NSC 2927, NSC 52336, NSC 54069, NSC 5575, NSC 77075, NSC 78795; object_uuid=fo-b0c993dac61c2183
270,469 consensus_match cas_match_labels {"123-54-6":"exactMatch"} group_key=pentane-2,4-dione||dimension=Environmental > media=Water > water_body=Ocean; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'123-54-6': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-b0c993dac61c2183: {'123-54-6': 'exactMatch'}
276,462 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Acetylacetone'
283,068 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… rdkit_post_consensus from 'CC(=O)CC(C)=O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
289,509 strip_catalogue_altlabels altLabel [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… [{"@value":"2,4-Dioxopentane","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo"… Removed 8 catalogue altLabel value(s): 'NSC 139614' (registry code), 'NSC 2679' (registry code), 'NSC 2927' (registry code), 'NSC 52336' (registry code), 'NSC 54069' (registry code), 'NSC 5575' (registry code), 'NSC 77075' (registry code), 'NSC 78795' (registry code)
340,571 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/74767719-5d4b-… associations resolved on the elementary layer
390,817 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C5H8O2"],"… typed the way the ontology types it
398,595 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/10835 prefLabel ef:agent/bootstrap_labels ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v0 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v1
ef:activity/change/20260821T1554374006150000/10836 name ef:agent/bootstrap_labels ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v1 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v2
ef:activity/change/20260821T1554374006150000/23722 synonyms ef:agent/bootstrap_labels ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v2 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v3
ef:activity/change/20260821T1554374006150000/119146 context ef:agent/default_context_mapping ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v3 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v4
ef:activity/change/20260821T1554374006150000/119147 context_iri ef:agent/default_context_mapping ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v4 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v5
ef:activity/change/20260821T1554374006150000/216932 unit_iri ef:agent/unit_normalization ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v5 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v6
ef:activity/change/20260821T1554374006150000/223623 prefLabel ef:agent/normalize_name_case ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v6 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v7
ef:activity/change/20260821T1554374006150000/237493 properties ef:agent/enrich_references ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v7 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v8
ef:activity/change/20260821T1554374006150000/237494 skos_definition ef:agent/enrich_references ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v8 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v9
ef:activity/change/20260821T1554374006150000/237495 references ef:agent/enrich_references ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v9 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v10
ef:activity/change/20260821T1554374006150000/251276 properties ef:agent/rdkit_pre_consensus ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v10 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v11
ef:activity/change/20260821T1554374006150000/255907 altLabel ef:agent/chebi_altlabels ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v11 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v12
ef:activity/change/20260821T1554374006150000/270466 prefLabel ef:agent/consensus_match ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v12 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v13
ef:activity/change/20260821T1554374006150000/270467 altLabel ef:agent/consensus_match ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v13 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v14
ef:activity/change/20260821T1554374006150000/270468 altLabel ef:agent/consensus_match ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v14 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v15
ef:activity/change/20260821T1554374006150000/270469 cas_match_labels ef:agent/consensus_match ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v15 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v16
ef:activity/change/20260821T1554374006150000/276462 properties ef:agent/opsin_iupac ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v16 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v17
ef:activity/change/20260821T1554374006150000/283068 properties ef:agent/rdkit_post_consensus ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v17 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v18
ef:activity/change/20260821T1554374006150000/289509 altLabel ef:agent/strip_catalogue_altlabels ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v18 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v19
ef:activity/change/20260821T1554374006150000/340571 concept_associations ef:agent/carry_associations_onto_flows ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v19 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v20
ef:activity/change/20260821T1554374006150000/390817 properties ef:agent/normalise_property_values ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v20 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v21
ef:activity/change/20260821T1554374006150000/398595 types ef:agent/link_flows_to_their_substance ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v21 ef:flow/74767719-5d4b-469a-949c-0ec24e596140/v22

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