Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'FEMA 2754' (grade code), 'NSC 8406' (registry code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=2-methylvalericacid||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'97-61-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-490fc0d66e36fcc6: {'97-61-0': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['97-61-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_167644']; candidate_pubchem_cids=[7062, 7341, 642231, 6950109]; selected_pubchem_cids=[7341]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
18,710 bootstrap_labels prefLabel [{"@value":"2-methylvaleric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… Bootstrapped prefLabel from legacy name field
18,711 bootstrap_labels name 2-methylvaleric acid Purged legacy name field to enforce prefLabel usage
18,712 bootstrap_labels synonyms ["(+/-)-2-Methylvaleric acid",".alpha.-Methylvaleric acid","2-Methylpentanoic acid","2-Pentanecarboxylic acid","AC1L1OJ… [] Removed legacy synonyms field in favor of structured labels
119,774 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
119,775 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
219,448 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
225,350 normalize_name_case prefLabel [{"@value":"2-methylvaleric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… [{"@value":"2-methylvaleric Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttribut… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
244,634 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
244,635 enrich_references skos_definition [{"@value":"A methyl-branched fatty acid that is pentanoic acid which carries a methyl group at position 2.","@language… Merged ChEBI/PubChem definitions into skos:definition
244,636 enrich_references references [] [{"@id":"foodb.food:FDB008203","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedT… Added references with provenance; cas_numbers=['97-61-0']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_167644']; candidate_pubchem_cids=[7062, 7341, 642231, 6950109]; selected_pubchem_cids=[7341]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,832 chebi_altlabels altLabel [] [{"@value":"2-methyl-n-valeric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Added 6 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
261,202 consensus_match altLabel [{"@value":"2-methyl-n-valeric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"2-methyl-n-valeric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… group_key=2-methylvalericacid||dimension=Environmental > media=Ground > geography=Unknown; cas=97-61-0; added Common Chemistry CAS names as altLabel: (±)-2-Methylpentanoic acid, <span class="text-smallcaps">DL</span>-2-Methylpentanoic acid, NSC 8406, Pentanoic acid, 2-methyl-, Valeric acid, 2-methyl-, Valeric acid, α-methyl-, α-Methylvaleric acid; object_uuid=fo-490fc0d66e36fcc6
261,203 consensus_match cas_match_labels {"97-61-0":"exactMatch"} group_key=2-methylvalericacid||dimension=Environmental > media=Ground > geography=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'97-61-0': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-490fc0d66e36fcc6: {'97-61-0': 'exactMatch'}
278,560 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '2-methylvaleric Acid'
285,332 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… rdkit_post_consensus from 'CCCC(C)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
291,021 strip_catalogue_altlabels altLabel [{"@value":"2-methyl-n-valeric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… [{"@value":"2-methyl-n-valeric acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttrib… Removed 2 catalogue altLabel value(s): 'FEMA 2754' (grade code), 'NSC 8406' (registry code)
340,885 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/759178ae-8995-… associations resolved on the elementary layer
392,927 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H12O2"],… typed the way the ontology types it
401,630 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1302361922970000/18710 prefLabel ef:agent/bootstrap_labels ef:flow/759178ae-8995-450e-8d0d-814461a83189/v0 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v1
ef:activity/change/20260821T1302361922970000/18711 name ef:agent/bootstrap_labels ef:flow/759178ae-8995-450e-8d0d-814461a83189/v1 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v2
ef:activity/change/20260821T1302361922970000/18712 synonyms ef:agent/bootstrap_labels ef:flow/759178ae-8995-450e-8d0d-814461a83189/v2 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v3
ef:activity/change/20260821T1302361922970000/119774 context ef:agent/default_context_mapping ef:flow/759178ae-8995-450e-8d0d-814461a83189/v3 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v4
ef:activity/change/20260821T1302361922970000/119775 context_iri ef:agent/default_context_mapping ef:flow/759178ae-8995-450e-8d0d-814461a83189/v4 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v5
ef:activity/change/20260821T1302361922970000/219448 unit_iri ef:agent/unit_normalization ef:flow/759178ae-8995-450e-8d0d-814461a83189/v5 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v6
ef:activity/change/20260821T1302361922970000/225350 prefLabel ef:agent/normalize_name_case ef:flow/759178ae-8995-450e-8d0d-814461a83189/v6 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v7
ef:activity/change/20260821T1302361922970000/244634 properties ef:agent/enrich_references ef:flow/759178ae-8995-450e-8d0d-814461a83189/v7 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v8
ef:activity/change/20260821T1302361922970000/244635 skos_definition ef:agent/enrich_references ef:flow/759178ae-8995-450e-8d0d-814461a83189/v8 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v9
ef:activity/change/20260821T1302361922970000/244636 references ef:agent/enrich_references ef:flow/759178ae-8995-450e-8d0d-814461a83189/v9 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v10
ef:activity/change/20260821T1302361922970000/256832 altLabel ef:agent/chebi_altlabels ef:flow/759178ae-8995-450e-8d0d-814461a83189/v10 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v11
ef:activity/change/20260821T1302361922970000/261202 altLabel ef:agent/consensus_match ef:flow/759178ae-8995-450e-8d0d-814461a83189/v11 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v12
ef:activity/change/20260821T1302361922970000/261203 cas_match_labels ef:agent/consensus_match ef:flow/759178ae-8995-450e-8d0d-814461a83189/v12 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v13
ef:activity/change/20260821T1302361922970000/278560 properties ef:agent/opsin_iupac ef:flow/759178ae-8995-450e-8d0d-814461a83189/v13 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v14
ef:activity/change/20260821T1302361922970000/285332 properties ef:agent/rdkit_post_consensus ef:flow/759178ae-8995-450e-8d0d-814461a83189/v14 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v15
ef:activity/change/20260821T1302361922970000/291021 altLabel ef:agent/strip_catalogue_altlabels ef:flow/759178ae-8995-450e-8d0d-814461a83189/v15 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v16
ef:activity/change/20260821T1302361922970000/340885 concept_associations ef:agent/carry_associations_onto_flows ef:flow/759178ae-8995-450e-8d0d-814461a83189/v16 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v17
ef:activity/change/20260821T1302361922970000/392927 properties ef:agent/normalise_property_values ef:flow/759178ae-8995-450e-8d0d-814461a83189/v17 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v18
ef:activity/change/20260821T1302361922970000/401630 types ef:agent/link_flows_to_their_substance ef:flow/759178ae-8995-450e-8d0d-814461a83189/v18 ef:flow/759178ae-8995-450e-8d0d-814461a83189/v19

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