Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 4 chebi_altlabels, consensus_match, dedupe_altlabels, strip_cross_object_altlabels Deduplicated altLabel values and removed entries matching prefLabel
cas_match_labels 1 consensus_match group_key=(2e)-3-phenylprop-2-enal||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi']; cas_sources={'14371-10-9': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-88d1f3e0119b7c99: {'14371-10-9': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
prefLabel 1 bootstrap_labels Bootstrapped prefLabel from legacy name field
references 1 enrich_references Added references with provenance; cas_numbers=['14371-10-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16731']; candidate_pubchem_cids=[307, 288301, 335255, 637511]; selected_pubchem_cids=[637511]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
14,371 bootstrap_labels prefLabel [{"@value":"(2E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttr… Bootstrapped prefLabel from legacy name field
14,372 bootstrap_labels name (2E)-3-phenylprop-2-enal Purged legacy name field to enforce prefLabel usage
14,373 bootstrap_labels synonyms ["organic","2-propenal,3-phenyl-,(2e)-othernamescinnamaldehyde","trans-cinnamaldehyde"] [] Removed legacy synonyms field in favor of structured labels
121,272 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Long-term"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
121,273 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-lote Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to water, unspecified (long-term)
218,090 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
240,796 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,797 enrich_references skos_definition [{"@value":"The E (trans) stereoisomer of cinnamaldehyde, the parent of the class of cinnamaldehydes.","@language":"en"… Merged ChEBI/PubChem definitions into skos:definition
240,798 enrich_references references [] [{"@id":"bpdb:1069","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"consens… Added references with provenance; cas_numbers=['14371-10-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_16731']; candidate_pubchem_cids=[307, 288301, 335255, 637511]; selected_pubchem_cids=[637511]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,242 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… rdkit_pre_consensus from 'C1=CC=C(C=C1)/C=C/C=O'; added: monoisotopic_mass
256,320 chebi_altlabels altLabel [] [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Added 11 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
257,461 strip_cross_object_altlabels altLabel [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Removed 1 altLabel value(s) that duplicate another flow object's prefLabel: '3-phenylacrylaldehyde'
257,646 consensus_match altLabel [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… group_key=(2e)-3-phenylprop-2-enal||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); cas=14371-10-9; added Common Chemistry CAS names as altLabel: (2<em>E</em>)-3-Phenyl-2-propenal, (<em>E</em>)-3-Phenylacrolein, (<em>E</em>)-3-Phenylprop-2-en-1-al, (<em>E</em>)-3-Phenylprop-2-enal, (<em>E</em>)-3-Phenylprop-2-enone, 2-Propenal, 3-phenyl-, (2<em>E</em>)-, 2-Propenal, 3-phenyl-, (<em>E</em>)-, <em>E</em>-Cinnamyl aldehyde, <em>trans</em>-3-Phenyl-2-propenal, <em>trans</em>-3-Phenylpropenal, <em>trans</em>-Benzenepropenal, <em>trans</em>-Cinnamaldehyde, <em>trans</em>-Cinnamylaldehyde, Cinnamaldehyde, (<em>E</em>)-; object_uuid=fo-88d1f3e0119b7c99
257,647 consensus_match cas_match_labels {"14371-10-9":"exactMatch"} group_key=(2e)-3-phenylprop-2-enal||dimension=Environmental > media=Air > strata=Ground level > population_density=Urban (>1000 people/square mile); group_sources=['chebi']; cas_sources={'14371-10-9': ['chebi']}; assigned CAS labels from group consensus; object_uuid=fo-88d1f3e0119b7c99: {'14371-10-9': 'exactMatch'}
277,452 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2E)-3-phenylprop-2-enal'
284,135 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… rdkit_post_consensus from 'O=C/C=C/c1ccccc1'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,781 dedupe_altlabels altLabel [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… [{"@value":"(3E)-3-phenylprop-2-enal","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttri… Deduplicated altLabel values and removed entries matching prefLabel
341,654 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/78248271-1138-… associations resolved on the elementary layer
391,807 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… typed the way the ontology types it
399,996 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,997 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C9H8O"],"a… the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/14371 prefLabel ef:agent/bootstrap_labels ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v0 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v1
ef:activity/change/20260820T0738569779880000/14372 name ef:agent/bootstrap_labels ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v1 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v2
ef:activity/change/20260820T0738569779880000/14373 synonyms ef:agent/bootstrap_labels ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v2 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v3
ef:activity/change/20260820T0738569779880000/121272 context ef:agent/default_context_mapping ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v3 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v4
ef:activity/change/20260820T0738569779880000/121273 context_iri ef:agent/default_context_mapping ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v4 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v5
ef:activity/change/20260820T0738569779880000/218090 unit_iri ef:agent/unit_normalization ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v5 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v6
ef:activity/change/20260820T0738569779880000/240796 properties ef:agent/enrich_references ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v6 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v7
ef:activity/change/20260820T0738569779880000/240797 skos_definition ef:agent/enrich_references ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v7 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v8
ef:activity/change/20260820T0738569779880000/240798 references ef:agent/enrich_references ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v8 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v9
ef:activity/change/20260820T0738569779880000/252242 properties ef:agent/rdkit_pre_consensus ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v9 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v10
ef:activity/change/20260820T0738569779880000/256320 altLabel ef:agent/chebi_altlabels ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v10 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v11
ef:activity/change/20260820T0738569779880000/257461 altLabel ef:agent/strip_cross_object_altlabels ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v11 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v12
ef:activity/change/20260820T0738569779880000/257646 altLabel ef:agent/consensus_match ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v12 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v13
ef:activity/change/20260820T0738569779880000/257647 cas_match_labels ef:agent/consensus_match ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v13 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v14
ef:activity/change/20260820T0738569779880000/277452 properties ef:agent/opsin_iupac ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v14 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v15
ef:activity/change/20260820T0738569779880000/284135 properties ef:agent/rdkit_post_consensus ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v15 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v16
ef:activity/change/20260820T0738569779880000/292781 altLabel ef:agent/dedupe_altlabels ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v16 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v17
ef:activity/change/20260820T0738569779880000/341654 concept_associations ef:agent/carry_associations_onto_flows ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v17 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v18
ef:activity/change/20260820T0738569779880000/391807 properties ef:agent/normalise_property_values ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v18 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v19
ef:activity/change/20260820T0738569779880000/399996 types ef:agent/link_flows_to_their_substance ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v19 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v20
ef:activity/change/20260820T0738569779880000/399997 properties ef:agent/link_flows_to_their_substance ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v20 ef:flow/78248271-1138-4331-818c-01dbcf1b9419/v21

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