Citric Acid
Everything that changed this flow. Back to the flow
798bfe9d-ba62-46c5-a490-9c7f29a9d06a
By field
13 fields| Field | Changes | Written by | Latest note |
|---|---|---|---|
| properties | 5 | enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus | typed the way the ontology types it |
| altLabel | 3 | chebi_altlabels, consensus_match, strip_catalogue_altlabels | Removed 17 catalogue altLabel value(s): 'C 1949' (grade code), 'Citrosol 502' (trade name), 'E 330' (grade code), 'EL 4' (grade code), 'EL 4 (polycarboxylic acid)' (grade code), 'F 0001 (polycarboxylic acid)' (grade code), 'F 3500' (grade code), 'F 4020' (grade code), 'FE 2' (grade code), 'INS 330' (grade code), 'KK 120' (grade code), 'NSC 112226' (registry code), 'NSC 30279' (registry code), 'NSC 626579' (registry code), 'PAS 33' (grade code), 'SH 74' (grade code), 'TBA 80' (grade code) |
| prefLabel | 2 | bootstrap_labels, normalize_name_case | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| cas_match_labels | 1 | consensus_match | group_key=citricacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'77-92-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0ea1a43a8ab28905: {'77-92-9': 'exactMatch'} |
| concept_associations | 1 | carry_associations_onto_flows | associations resolved on the elementary layer |
| context | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| context_iri | 1 | default_context_mapping | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| name | 1 | bootstrap_labels | Purged legacy name field to enforce prefLabel usage |
| references | 1 | enrich_references | Added references with provenance; cas_numbers=['77-92-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30769']; candidate_pubchem_cids=[311, 31348, 68654, 19782904]; selected_pubchem_cids=[311]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| skos_definition | 1 | enrich_references | Merged ChEBI/PubChem definitions into skos:definition |
| synonyms | 1 | bootstrap_labels | Removed legacy synonyms field in favor of structured labels |
| types | 1 | link_flows_to_their_substance | the substance's answer, copied onto its flow |
| unit_iri | 1 | unit_normalization | Unit IRI set from normalization of 'kg' |
Where several steps wrote one field, the last one won — and the log below shows the sequence.
Changes
20| # | Step | Field | From | To | Why |
|---|---|---|---|---|---|
| 22,209 | bootstrap_labels | prefLabel | — | [{"@value":"citric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… | Bootstrapped prefLabel from legacy name field |
| 22,210 | bootstrap_labels | name | citric acid | — | Purged legacy name field to enforce prefLabel usage |
| 22,211 | bootstrap_labels | synonyms | [".beta.-Hydroxytricarballylic acid","1,2,3-PROPANETRICARBOXYLIC ACID,2-HYDROXY (CITRIC ACID)","1,2,3-Propanetricarboxy… | [] | Removed legacy synonyms field in favor of structured labels |
| 122,071 | default_context_mapping | context | — | {"dimension":"Environmental","media":"Air","strata":"Ground level","population_density":"Urban (>1000 people/square mil… | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 122,072 | default_context_mapping | context_iri | — | https://vocab.brightway.one/flow-contexts/envi-air-grle-ur10pesq | Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to air > Emissions to urban air close to ground |
| 220,418 | unit_normalization | unit_iri | — | https://vocab.brightway.one/units/unit/KiloGM | Unit IRI set from normalization of 'kg' |
| 226,104 | normalize_name_case | prefLabel | [{"@value":"citric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… | [{"@value":"Citric Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels","prov:wasAttributedTo":"br… | Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character) |
| 247,320 | enrich_references | properties | {} | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1) |
| 247,321 | enrich_references | skos_definition | — | [{"@value":"A tricarboxylic acid that is propane-1,2,3-tricarboxylic acid bearing a hydroxy substituent at position 2.… | Merged ChEBI/PubChem definitions into skos:definition |
| 247,322 | enrich_references | references | [] | [{"@id":"bpdb:1359","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"brightw… | Added references with provenance; cas_numbers=['77-92-9']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_30769']; candidate_pubchem_cids=[311, 31348, 68654, 19782904]; selected_pubchem_cids=[311]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes |
| 254,133 | rdkit_pre_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | rdkit_pre_consensus from 'C(C(=O)O)C(CC(=O)O)(C(=O)O)O'; added: monoisotopic_mass |
| 257,185 | chebi_altlabels | altLabel | [] | [{"@value":"2-Hydroxy-1,2,3-propanetricarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabel… | Added 7 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s) |
| 265,214 | consensus_match | altLabel | [{"@value":"2-Hydroxy-1,2,3-propanetricarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabel… | [{"@value":"2-Hydroxy-1,2,3-propanetricarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabel… | group_key=citricacid||dimension=Environmental > media=Water > water_body=Surface water; cas=77-92-9; added Common Chemistry CAS names as altLabel: 1,2,3-Propanetricarboxylic acid, 2-hydroxy-, 2-Hydroxy-1,2,3-propanetricarboxyic acid, 2-Hydroxypropan-1,2,3-tricarboxylic acid, 3-Carboxy-3-hydroxy-pentanedioic acid, 3-Hydroxy-3-carboxy-1,5-pentanedioic acid, 3-Hydroxy-3-carboxypentanedioic acid, 3-Hydroxy-pentane-1,3-5-trioic acid, 32: PN: CN118717671 SEQID: 106 claimed protein, 8: PN: WO2017048620 SEQID: 13 claimed sequence, Aciletten, BioLink Acidifier, C 1949, Celenex 3P6, Cellborn SC-C, Chemfill, Citretten, Citric acid monoglyceride, Citro, Citrosol 502, E 330, EL 4, EL 4 (polycarboxylic acid), EMPROVE Essential Ph Eur, BP,JP,USP, E 330, FCC, F 0001 (polycarboxylic acid), F 3500, F 4020, FE 2, Grindsted Pro Tex TR 100, Hydrocerol A, INS 330, Jet Setter, KK 120, Liquinat L 50, MeSH ID: D019343, Monoglyceride citrate, NSC 112226, NSC 30279, NSC 626579, PAS 33, SH 74, Suby G, TBA 80, Uro-trainer; object_uuid=fo-0ea1a43a8ab28905 |
| 265,215 | consensus_match | cas_match_labels | — | {"77-92-9":"exactMatch"} | group_key=citricacid||dimension=Environmental > media=Water > water_body=Surface water; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'77-92-9': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-0ea1a43a8ab28905: {'77-92-9': 'exactMatch'} |
| 279,336 | opsin_iupac | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Citric Acid' |
| 286,208 | rdkit_post_consensus | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | rdkit_post_consensus from 'O=C(O)CC(O)(CC(=O)O)C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass |
| 291,590 | strip_catalogue_altlabels | altLabel | [{"@value":"2-Hydroxy-1,2,3-propanetricarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabel… | [{"@value":"2-Hydroxy-1,2,3-propanetricarboxylic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabel… | Removed 17 catalogue altLabel value(s): 'C 1949' (grade code), 'Citrosol 502' (trade name), 'E 330' (grade code), 'EL 4' (grade code), 'EL 4 (polycarboxylic acid)' (grade code), 'F 0001 (polycarboxylic acid)' (grade code), 'F 3500' (grade code), 'F 4020' (grade code), 'FE 2' (grade code), 'INS 330' (grade code), 'KK 120' (grade code), 'NSC 112226' (registry code), 'NSC 30279' (registry code), 'NSC 626579' (registry code), 'PAS 33' (grade code), 'SH 74' (grade code), 'TBA 80' (grade code) |
| 342,070 | carry_associations_onto_flows | concept_associations | [] | [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/798bfe9d-ba62-… | associations resolved on the elementary layer |
| 393,752 | normalise_property_values | properties | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C6H8O7"],"… | typed the way the ontology types it |
| 402,903 | link_flows_to_their_substance | types | — | ["https://w3id.org/chemrof/NeutralMolecule"] | the substance's answer, copied onto its flow |
PROV-O trail
20 activitiesOne activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.
| Activity | Field | Agent | Used | Generated |
|---|---|---|---|---|
| ef:activity/change/20261019T0712047113160000/22209 | prefLabel | ef:agent/bootstrap_labels | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v0 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v1 |
| ef:activity/change/20261019T0712047113160000/22210 | name | ef:agent/bootstrap_labels | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v1 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v2 |
| ef:activity/change/20261019T0712047113160000/22211 | synonyms | ef:agent/bootstrap_labels | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v2 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v3 |
| ef:activity/change/20261019T0712047113160000/122071 | context | ef:agent/default_context_mapping | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v3 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v4 |
| ef:activity/change/20261019T0712047113160000/122072 | context_iri | ef:agent/default_context_mapping | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v4 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v5 |
| ef:activity/change/20261019T0712047113160000/220418 | unit_iri | ef:agent/unit_normalization | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v5 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v6 |
| ef:activity/change/20261019T0712047113160000/226104 | prefLabel | ef:agent/normalize_name_case | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v6 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v7 |
| ef:activity/change/20261019T0712047113160000/247320 | properties | ef:agent/enrich_references | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v7 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v8 |
| ef:activity/change/20261019T0712047113160000/247321 | skos_definition | ef:agent/enrich_references | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v8 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v9 |
| ef:activity/change/20261019T0712047113160000/247322 | references | ef:agent/enrich_references | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v9 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v10 |
| ef:activity/change/20261019T0712047113160000/254133 | properties | ef:agent/rdkit_pre_consensus | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v10 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v11 |
| ef:activity/change/20261019T0712047113160000/257185 | altLabel | ef:agent/chebi_altlabels | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v11 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v12 |
| ef:activity/change/20261019T0712047113160000/265214 | altLabel | ef:agent/consensus_match | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v12 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v13 |
| ef:activity/change/20261019T0712047113160000/265215 | cas_match_labels | ef:agent/consensus_match | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v13 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v14 |
| ef:activity/change/20261019T0712047113160000/279336 | properties | ef:agent/opsin_iupac | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v14 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v15 |
| ef:activity/change/20261019T0712047113160000/286208 | properties | ef:agent/rdkit_post_consensus | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v15 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v16 |
| ef:activity/change/20261019T0712047113160000/291590 | altLabel | ef:agent/strip_catalogue_altlabels | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v16 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v17 |
| ef:activity/change/20261019T0712047113160000/342070 | concept_associations | ef:agent/carry_associations_onto_flows | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v17 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v18 |
| ef:activity/change/20261019T0712047113160000/393752 | properties | ef:agent/normalise_property_values | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v18 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v19 |
| ef:activity/change/20261019T0712047113160000/402903 | types | ef:agent/link_flows_to_their_substance | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v19 | ef:flow/798bfe9d-ba62-46c5-a490-9c7f29a9d06a/v20 |