Consensus flow list

By field

14 fields
Field Changes Written by Latest note
properties 6 enrich_references, link_flows_to_their_substance, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus the substance's answer, copied onto its flow
altLabel 3 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 3 catalogue altLabel value(s): 'NSC 146877' (registry code), 'NSC 148832' (registry code), 'PBI 58' (grade code)
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=[s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'21293-29-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-4333c0d8e1c83071: {'21293-29-8': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['21293-29-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2365']; candidate_pubchem_cids=[30583, 287291, 643732, 5280896, 5375199, 5375200, 5702609, 76969801]; selected_pubchem_cids=[5280896]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
roles 1 link_flows_to_their_substance the substance's answer, copied onto its flow
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

22
# Step Field From To Why
14,138 bootstrap_labels prefLabel [{"@value":"[s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic acid","@language"… Bootstrapped prefLabel from legacy name field
14,139 bootstrap_labels name [s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic acid Purged legacy name field to enforce prefLabel usage
14,140 bootstrap_labels synonyms ["organic"] [] Removed legacy synonyms field in favor of structured labels
122,268 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
122,269 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
218,013 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,363 normalize_name_case prefLabel [{"@value":"[s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic acid","@language"… [{"@value":"[s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoic Acid","@language"… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
240,572 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
240,573 enrich_references skos_definition [{"@value":"The naturally occurring (1'S)-(+) enantiomer of abscisic acid. It is an important sesquiterpenoid plant hor… Merged ChEBI/PubChem definitions into skos:definition
240,574 enrich_references references [] [{"@id":"beilstein:4190247","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":… Added references with provenance; cas_numbers=['21293-29-8']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_2365']; candidate_pubchem_cids=[30583, 287291, 643732, 5280896, 5375199, 5375200, 5702609, 76969801]; selected_pubchem_cids=[5280896]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
252,178 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… rdkit_pre_consensus from 'CC1=CC(=O)CC(C)(C)[C@@]1(O)/C=C/C(C)=CC(=O)O'; added: inchi2d_string, inchi2d_key_string, monoisotopic_mass
256,294 chebi_altlabels altLabel [] [{"@value":"(+)-(S)-ABA","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Added 10 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,475 consensus_match altLabel [{"@value":"(+)-(S)-ABA","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"(+)-(S)-ABA","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… group_key=[s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; cas=21293-29-8; added Common Chemistry CAS names as altLabel: (+)-(<em>S</em>)-Abscisic acid, (+)-(<em>cis</em>,<em>trans</em>)-Abscisic acid, (+)-<em>cis</em>-Abscisic acid, (+)-ABA, (+)-Abscisin II, (2<em>Z</em>,4<em>E</em>)-5-[(1<em>S</em>)-1-Hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-methyl-2,4-pentadienoic acid, (<em>S</em>)-(+)-ABA, (<em>S</em>)-ABA, (<em>Z</em>,<em>E</em>)-Abscisic acid, 2,4-Pentadienoic acid, 5-(1-hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl)-3-methyl-, (<em>Z</em>,<em>E</em>)-(<em>S</em>)-(+)-, 2,4-Pentadienoic acid, 5-(1-hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl)-3-methyl-, [<em>S</em>-(<em>Z</em>,<em>E</em>)]-, 2,4-Pentadienoic acid, 5-[(1<em>S</em>)-1-hydroxy-2,6,6-trimethyl-4-oxo-2-cyclohexen-1-yl]-3-methyl-, (2<em>Z</em>,4<em>E</em>)-, <em>cis</em>,<em>trans</em>-Abscisic acid, <em>cis</em>-<em>trans</em>-(+)-Abscisic acid, <em>cis</em>-Abscisic acid, ABK, Abscisic acid, (+)-, Dormin, Dormin (abscission factor), MeSH ID: D000040, NSC 146877, NSC 148832, PBI 58, ProTone; object_uuid=fo-4333c0d8e1c83071
263,476 consensus_match cas_match_labels {"21293-29-8":"exactMatch"} group_key=[s-(z,e)]-5-(1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl)-3-methylpenta-2,4-dienoicacid||dimension=Environmental > media=Ground > geography=Non-agricultural; group_sources=['chebi', 'ec_inventory']; cas_sources={'21293-29-8': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-4333c0d8e1c83071: {'21293-29-8': 'exactMatch'}
277,385 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '(2Z,4E)-5-[(1S)-1-hydroxy-2,6,6-trimethyl-4-oxocyclohex-2-en-1-yl]-3-methylpenta-2,4-dienoic acid'
284,063 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… rdkit_post_consensus from 'CC1=CC(=O)CC(C)(C)[C@@]1(O)/C=C/C(C)=C\\C(=O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
290,175 strip_catalogue_altlabels altLabel [{"@value":"(+)-(S)-ABA","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… [{"@value":"(+)-(S)-ABA","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"con… Removed 3 catalogue altLabel value(s): 'NSC 146877' (registry code), 'NSC 148832' (registry code), 'PBI 58' (grade code)
342,152 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/79e181d0-7f2f-… associations resolved on the elementary layer
391,743 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… typed the way the ontology types it
399,906 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow
399,907 link_flows_to_their_substance roles [{"@id":"http://purl.obolibrary.org/obo/CHEBI_26155","rdfs:label":"plant growth regulator","http://www.w3.org/2004/02/s… the substance's answer, copied onto its flow
399,908 link_flows_to_their_substance properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C15H20O4"]… the substance's answer, copied onto its flow

PROV-O trail

22 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T0738569779880000/14138 prefLabel ef:agent/bootstrap_labels ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v0 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v1
ef:activity/change/20260820T0738569779880000/14139 name ef:agent/bootstrap_labels ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v1 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v2
ef:activity/change/20260820T0738569779880000/14140 synonyms ef:agent/bootstrap_labels ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v2 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v3
ef:activity/change/20260820T0738569779880000/122268 context ef:agent/default_context_mapping ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v3 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v4
ef:activity/change/20260820T0738569779880000/122269 context_iri ef:agent/default_context_mapping ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v4 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v5
ef:activity/change/20260820T0738569779880000/218013 unit_iri ef:agent/unit_normalization ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v5 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v6
ef:activity/change/20260820T0738569779880000/224363 prefLabel ef:agent/normalize_name_case ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v6 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v7
ef:activity/change/20260820T0738569779880000/240572 properties ef:agent/enrich_references ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v7 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v8
ef:activity/change/20260820T0738569779880000/240573 skos_definition ef:agent/enrich_references ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v8 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v9
ef:activity/change/20260820T0738569779880000/240574 references ef:agent/enrich_references ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v9 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v10
ef:activity/change/20260820T0738569779880000/252178 properties ef:agent/rdkit_pre_consensus ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v10 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v11
ef:activity/change/20260820T0738569779880000/256294 altLabel ef:agent/chebi_altlabels ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v11 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v12
ef:activity/change/20260820T0738569779880000/263475 altLabel ef:agent/consensus_match ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v12 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v13
ef:activity/change/20260820T0738569779880000/263476 cas_match_labels ef:agent/consensus_match ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v13 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v14
ef:activity/change/20260820T0738569779880000/277385 properties ef:agent/opsin_iupac ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v14 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v15
ef:activity/change/20260820T0738569779880000/284063 properties ef:agent/rdkit_post_consensus ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v15 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v16
ef:activity/change/20260820T0738569779880000/290175 altLabel ef:agent/strip_catalogue_altlabels ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v16 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v17
ef:activity/change/20260820T0738569779880000/342152 concept_associations ef:agent/carry_associations_onto_flows ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v17 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v18
ef:activity/change/20260820T0738569779880000/391743 properties ef:agent/normalise_property_values ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v18 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v19
ef:activity/change/20260820T0738569779880000/399906 types ef:agent/link_flows_to_their_substance ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v19 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v20
ef:activity/change/20260820T0738569779880000/399907 roles ef:agent/link_flows_to_their_substance ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v20 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v21
ef:activity/change/20260820T0738569779880000/399908 properties ef:agent/link_flows_to_their_substance ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v21 ef:flow/79e181d0-7f2f-4dae-a911-4fa10443bc6a/v22

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