Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 5 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus, rdkit_pre_consensus typed the way the ontology types it
altLabel 4 chebi_altlabels, consensus_match, strip_catalogue_altlabels Removed 2 catalogue altLabel value(s): 'NSC 16932' (registry code), 'NSC 35352' (registry code)
prefLabel 2 bootstrap_labels, consensus_match cas=6635-20-7; cc_chebi_agreed_name='5-Nitrovanillin'; object_uuid=fo-15a459f5b8288928
cas_match_labels 1 consensus_match group_key=4-hydroxy-3-methoxy-5-nitrobenzaldehyde||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'6635-20-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-15a459f5b8288928: {'6635-20-7': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['6635-20-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_48385']; candidate_pubchem_cids=[81134, 194098, 3583651]; selected_pubchem_cids=[81134]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

21
# Step Field From To Why
465 bootstrap_labels prefLabel [{"@value":"4-hydroxy-3-methoxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels… Bootstrapped prefLabel from legacy name field
466 bootstrap_labels name 4-hydroxy-3-methoxy-5-nitrobenzaldehyde Purged legacy name field to enforce prefLabel usage
467 bootstrap_labels synonyms ["organic","5-nitrovanillin","5-nitrovanillinothernames4-hydroxy-3-methoxy-5-nitrobenzaldehyde","benzaldehyde,4-hydroxy… [] Removed legacy synonyms field in favor of structured labels
124,488 default_context_mapping context {"dimension":"Environmental","media":"Ground","geography":"Agricultural"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
124,489 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-grou-agri Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to soil > Emissions to agricultural soil
213,494 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
227,613 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
227,614 enrich_references skos_definition [{"@value":"A member of the class of benzaldehydes that is vanillin in which the hydrogen ortho- to the hydroxy group i… Merged ChEBI/PubChem definitions into skos:definition
227,615 enrich_references references [] [{"@id":"http://jglobal.jst.go.jp/en/redirect?Nikkaji_No=J238K","provenance":{"prov:wasGeneratedBy":"enrich_references.… Added references with provenance; cas_numbers=['6635-20-7']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_48385']; candidate_pubchem_cids=[81134, 194098, 3583651]; selected_pubchem_cids=[81134]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
248,441 rdkit_pre_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… rdkit_pre_consensus from 'COC1=CC(=CC(=C1O)[N+](=O)[O-])C=O'; added: monoisotopic_mass
254,443 chebi_altlabels altLabel [] [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… Added 2 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
262,763 consensus_match prefLabel [{"@value":"4-hydroxy-3-methoxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels… [{"@value":"5-Nitrovanillin","@language":"en","source":{"prov:wasGeneratedBy":"consensus_match","prov:wasAttributedTo":… cas=6635-20-7; cc_chebi_agreed_name='5-Nitrovanillin'; object_uuid=fo-15a459f5b8288928
262,764 consensus_match altLabel [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… cas=6635-20-7; added original name as altLabel after CC/ChEBI rename; object_uuid=fo-15a459f5b8288928
262,765 consensus_match altLabel [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… group_key=4-hydroxy-3-methoxy-5-nitrobenzaldehyde||dimension=Environmental > media=Water > water_body=Unknown; cas=6635-20-7; added Common Chemistry CAS names as altLabel: 3-Nitro-4-hydroxy-5-methoxybenzaldehyde, 4-Hydroxy-5-methoxy-3-nitrobenzaldehyde, 5-Nitro-4-hydroxy-3-methoxybenzaldehyde, Benzaldehyde, 4-hydroxy-3-methoxy-5-nitro-, NSC 16932, NSC 35352, Vanillin, 5-nitro-; object_uuid=fo-15a459f5b8288928
262,766 consensus_match cas_match_labels {"6635-20-7":"exactMatch"} group_key=4-hydroxy-3-methoxy-5-nitrobenzaldehyde||dimension=Environmental > media=Water > water_body=Unknown; group_sources=['chebi', 'ec_inventory', 'pubchem']; cas_sources={'6635-20-7': ['chebi', 'ec_inventory', 'pubchem']}; assigned CAS labels from group consensus; object_uuid=fo-15a459f5b8288928: {'6635-20-7': 'exactMatch'}
273,581 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from '5-Nitrovanillin'
279,941 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… rdkit_post_consensus from 'COc1cc(C=O)cc([N+](=O)[O-])c1O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
287,360 strip_catalogue_altlabels altLabel [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… [{"@value":"3-methoxy-4-hydroxy-5-nitrobenzaldehyde","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels"… Removed 2 catalogue altLabel value(s): 'NSC 16932' (registry code), 'NSC 35352' (registry code)
343,266 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7d7ec07c-cd6a-… associations resolved on the elementary layer
387,858 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["C8H7NO5"],… typed the way the ontology types it
394,372 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

21 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260820T1416470405690000/465 prefLabel ef:agent/bootstrap_labels ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v0 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v1
ef:activity/change/20260820T1416470405690000/466 name ef:agent/bootstrap_labels ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v1 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v2
ef:activity/change/20260820T1416470405690000/467 synonyms ef:agent/bootstrap_labels ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v2 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v3
ef:activity/change/20260820T1416470405690000/124488 context ef:agent/default_context_mapping ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v3 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v4
ef:activity/change/20260820T1416470405690000/124489 context_iri ef:agent/default_context_mapping ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v4 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v5
ef:activity/change/20260820T1416470405690000/213494 unit_iri ef:agent/unit_normalization ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v5 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v6
ef:activity/change/20260820T1416470405690000/227613 properties ef:agent/enrich_references ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v6 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v7
ef:activity/change/20260820T1416470405690000/227614 skos_definition ef:agent/enrich_references ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v7 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v8
ef:activity/change/20260820T1416470405690000/227615 references ef:agent/enrich_references ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v8 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v9
ef:activity/change/20260820T1416470405690000/248441 properties ef:agent/rdkit_pre_consensus ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v9 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v10
ef:activity/change/20260820T1416470405690000/254443 altLabel ef:agent/chebi_altlabels ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v10 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v11
ef:activity/change/20260820T1416470405690000/262763 prefLabel ef:agent/consensus_match ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v11 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v12
ef:activity/change/20260820T1416470405690000/262764 altLabel ef:agent/consensus_match ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v12 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v13
ef:activity/change/20260820T1416470405690000/262765 altLabel ef:agent/consensus_match ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v13 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v14
ef:activity/change/20260820T1416470405690000/262766 cas_match_labels ef:agent/consensus_match ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v14 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v15
ef:activity/change/20260820T1416470405690000/273581 properties ef:agent/opsin_iupac ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v15 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v16
ef:activity/change/20260820T1416470405690000/279941 properties ef:agent/rdkit_post_consensus ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v16 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v17
ef:activity/change/20260820T1416470405690000/287360 altLabel ef:agent/strip_catalogue_altlabels ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v17 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v18
ef:activity/change/20260820T1416470405690000/343266 concept_associations ef:agent/carry_associations_onto_flows ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v18 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v19
ef:activity/change/20260820T1416470405690000/387858 properties ef:agent/normalise_property_values ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v19 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v20
ef:activity/change/20260820T1416470405690000/394372 types ef:agent/link_flows_to_their_substance ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v20 ef:flow/7d7ec07c-cd6a-45c9-8ea5-10002a72640d/v21

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