Consensus flow list

By field

13 fields
Field Changes Written by Latest note
properties 4 enrich_references, normalise_property_values, opsin_iupac, rdkit_post_consensus typed the way the ontology types it
altLabel 3 chebi_altlabels, consensus_match, dedupe_altlabels Deduplicated altLabel values and removed entries matching prefLabel
prefLabel 2 bootstrap_labels, normalize_name_case Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
cas_match_labels 1 consensus_match group_key=as(o)(oh)3arsenicacidorarsoricacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'7778-39-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-23998f704c0c6985: {'7778-39-4': 'exactMatch'}
concept_associations 1 carry_associations_onto_flows associations resolved on the elementary layer
context 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
context_iri 1 default_context_mapping Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
name 1 bootstrap_labels Purged legacy name field to enforce prefLabel usage
references 1 enrich_references Added references with provenance; cas_numbers=['7778-39-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_18231']; candidate_pubchem_cids=[233, 234]; selected_pubchem_cids=[234]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
skos_definition 1 enrich_references Merged ChEBI/PubChem definitions into skos:definition
synonyms 1 bootstrap_labels Removed legacy synonyms field in favor of structured labels
types 1 link_flows_to_their_substance the substance's answer, copied onto its flow
unit_iri 1 unit_normalization Unit IRI set from normalization of 'kg'

Where several steps wrote one field, the last one won — and the log below shows the sequence.

Changes

19
# Step Field From To Why
14,681 bootstrap_labels prefLabel [{"@value":"as(o)(oh)3 arsenic acid or arsoric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels… Bootstrapped prefLabel from legacy name field
14,682 bootstrap_labels name as(o)(oh)3 arsenic acid or arsoric acid Purged legacy name field to enforce prefLabel usage
14,683 bootstrap_labels synonyms ["inorganic","arsenicacid","arsenicacid,75%highpurityarsenicacid,acidearseniquesol75%,arsenicacid62%"] [] Removed legacy synonyms field in favor of structured labels
124,666 default_context_mapping context {"dimension":"Environmental","media":"Water","water_body":"Surface water"} Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
124,667 default_context_mapping context_iri https://vocab.brightway.one/flow-contexts/envi-wate-suwa Mapped from context mapping for source=EF 3.1, source context Emissions > Emissions to water > Emissions to fresh water
218,181 unit_normalization unit_iri https://vocab.brightway.one/units/unit/KiloGM Unit IRI set from normalization of 'kg'
224,483 normalize_name_case prefLabel [{"@value":"as(o)(oh)3 arsenic acid or arsoric acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels… [{"@value":"As(o)(oh)3 Arsenic Acid Or Arsoric Acid","@language":"en","source":{"prov:wasGeneratedBy":"bootstrap_labels… Title-cased words without internal capitals (preserved words with uppercase letters beyond the first character)
241,070 enrich_references properties {} {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… Added ChEBI/PubChem properties (chebi_ids=1, pubchem_cids=1)
241,071 enrich_references skos_definition [{"@value":"An arsenic oxoacid comprising one oxo group and three hydroxy groups attached to a central arsenic atom.","… Merged ChEBI/PubChem definitions into skos:definition
241,072 enrich_references references [] [{"@id":"gmelin:2294","provenance":{"prov:wasGeneratedBy":"enrich_references.chebi_xrefs","prov:wasAttributedTo":"conse… Added references with provenance; cas_numbers=['7778-39-4']; matched_chebi_ids=['http://purl.obolibrary.org/obo/CHEBI_18231']; candidate_pubchem_cids=[233, 234]; selected_pubchem_cids=[234]; formula_similarity_expected=[]; pubchem_selection_rule=curated_cas_then_formula_similarity_then_prefer_chebi_aligned_when_unambiguous_else_keep_all_cas_matches; single_cas_commonchem_link=yes
256,343 chebi_altlabels altLabel [] [{"@value":"Arsenic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Added 9 ChEBI synonym(s) as altLabel from 1 linked ChEBI record(s)
263,946 consensus_match altLabel [{"@value":"Arsenic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"Arsenic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… group_key=as(o)(oh)3arsenicacidorarsoricacid||dimension=Environmental > media=Air > strata=Long-term; cas=7778-39-4; added Common Chemistry CAS names as altLabel: Arsenic acid (H<sub>3</sub>AsO<sub>4</sub>); object_uuid=fo-23998f704c0c6985
263,947 consensus_match cas_match_labels {"7778-39-4":"exactMatch"} group_key=as(o)(oh)3arsenicacidorarsoricacid||dimension=Environmental > media=Air > strata=Long-term; group_sources=['chebi', 'ec_inventory']; cas_sources={'7778-39-4': ['chebi', 'ec_inventory']}; assigned CAS labels from group consensus; object_uuid=fo-23998f704c0c6985: {'7778-39-4': 'exactMatch'}
277,511 opsin_iupac properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… opsin_iupac: set authoritative IUPAC name, SMILES, InChI from 'Arsenic acid'
284,201 rdkit_post_consensus properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… rdkit_post_consensus from 'O=[As](O)(O)O'; confirmed: smiles_string, inchi2d_string, inchi2d_key_string, molecular_formula, molecular_mass, monoisotopic_mass
292,770 dedupe_altlabels altLabel [{"@value":"Arsenic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… [{"@value":"Arsenic acid","@language":"en","source":{"prov:wasGeneratedBy":"chebi_altlabels","prov:wasAttributedTo":"co… Deduplicated altLabel values and removed entries matching prefLabel
343,335 carry_associations_onto_flows concept_associations [] [{"@type":"xkos:ConceptAssociation","xkos:sourceConcept":{"@id":"https://vocab.brightway.one/ef/3.1/flow/7dd85dd6-c632-… associations resolved on the elementary layer
391,867 normalise_property_values properties {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… {"https://w3id.org/chemrof/molecular_formula":{"@id":"https://w3id.org/chemrof/molecular_formula","@value":["AsH3O4","H… typed the way the ontology types it
400,089 link_flows_to_their_substance types ["https://w3id.org/chemrof/NeutralMolecule"] the substance's answer, copied onto its flow

PROV-O trail

19 activities

One activity per change: which version of the flow it consumed, and which it produced. The values are on the change with the same number — stored once, not twice.

Activity Field Agent Used Generated
ef:activity/change/20260821T1554374006150000/14681 prefLabel ef:agent/bootstrap_labels ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v0 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v1
ef:activity/change/20260821T1554374006150000/14682 name ef:agent/bootstrap_labels ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v1 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v2
ef:activity/change/20260821T1554374006150000/14683 synonyms ef:agent/bootstrap_labels ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v2 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v3
ef:activity/change/20260821T1554374006150000/124666 context ef:agent/default_context_mapping ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v3 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v4
ef:activity/change/20260821T1554374006150000/124667 context_iri ef:agent/default_context_mapping ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v4 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v5
ef:activity/change/20260821T1554374006150000/218181 unit_iri ef:agent/unit_normalization ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v5 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v6
ef:activity/change/20260821T1554374006150000/224483 prefLabel ef:agent/normalize_name_case ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v6 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v7
ef:activity/change/20260821T1554374006150000/241070 properties ef:agent/enrich_references ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v7 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v8
ef:activity/change/20260821T1554374006150000/241071 skos_definition ef:agent/enrich_references ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v8 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v9
ef:activity/change/20260821T1554374006150000/241072 references ef:agent/enrich_references ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v9 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v10
ef:activity/change/20260821T1554374006150000/256343 altLabel ef:agent/chebi_altlabels ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v10 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v11
ef:activity/change/20260821T1554374006150000/263946 altLabel ef:agent/consensus_match ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v11 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v12
ef:activity/change/20260821T1554374006150000/263947 cas_match_labels ef:agent/consensus_match ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v12 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v13
ef:activity/change/20260821T1554374006150000/277511 properties ef:agent/opsin_iupac ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v13 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v14
ef:activity/change/20260821T1554374006150000/284201 properties ef:agent/rdkit_post_consensus ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v14 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v15
ef:activity/change/20260821T1554374006150000/292770 altLabel ef:agent/dedupe_altlabels ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v15 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v16
ef:activity/change/20260821T1554374006150000/343335 concept_associations ef:agent/carry_associations_onto_flows ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v16 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v17
ef:activity/change/20260821T1554374006150000/391867 properties ef:agent/normalise_property_values ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v17 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v18
ef:activity/change/20260821T1554374006150000/400089 types ef:agent/link_flows_to_their_substance ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v18 ef:flow/7dd85dd6-c632-46d7-9e61-aae1483b6842/v19

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